RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 OR13H1Q8NG92 308 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 GUCD1Q96NT3 240 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 ZNF700Q9H0M5 742 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 MYOTQ9UBF9 498 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 AK3Q9UIJ7 227 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 COL4A2P08572 1712 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 CT45A8P0DMV1 189 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 CT45A9P0DMV2 189 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 ATP6V0CP27449 155 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 ASCL1P50553 236 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 RPL27P61353 136 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 CD226Q15762 336 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 CT45A2Q5DJT8 189 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 SULF2Q8IWU5 870 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 KCNG3Q8TAE7 436 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 OR8D2Q9GZM6 311 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 V9GYS6 101 aa12.85□□□□□ -0.35
VPS9D1-201ENST00000389386 A0A1W2PP11 408 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 HCRTR1O43613 425 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 RPLP1P05386 114 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 CTSBP07858 339 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 NKAIN1Q4KMZ8 207 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 NUP54Q7Z3B4 507 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 OR5L2Q8NGL0 311 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 OR5D14Q8NGL3 314 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 FAM3CQ92520 227 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 HIST1H2AAQ96QV6 131 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 KLHDC3Q9BQ90 382 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 CABLES2Q9BTV7 478 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 FOXQ1Q9C009 403 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 FRYLO94915 3013 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 XKRY2A2RUG3 117 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 M0QZK8 103 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 CYB5R3P00387 301 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 CTSDP07339 412 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 MMP7P09237 267 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 GABRG2P18507 467 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 C1orf194Q5T5A4 169 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 DEFB119Q8N690 84 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 RLN3Q8WXF3 142 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 TMEM59Q9BXS4 323 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 COA3Q9Y2R0 106 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 DMDP11532 3685 aa12.84□□□□□ -0.35
VPS9D1-201ENST00000389386 DHRS7CA6NNS2 312 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 TP53I11O14683 189 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 OPN1MWP04001 364 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 OPN1MW2P0DN77 364 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 OPN1MW3P0DN78 364 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 OR3A1P47881 315 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 TAF9Q16594 264 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 IQCJQ1A5X6 159 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 DEFB110Q30KQ9 67 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 CHRFAM7AQ494W8 412 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 FNDC7Q5VTL7 733 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 ZNF573Q86YE8 665 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 FLVCR1-AS1Q8TAF5 88 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 STT3BQ8TCJ2 826 aa12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.35
VPS9D1-201ENST00000389386 FAM230AA0A1W2PPH8 454 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 TTRP02766 147 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 FGF5P12034 268 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 ZFP36L1Q07352 338 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 FIGLAQ6QHK4 219 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 SLC22A18ASQ8N1D0 253 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 HAS2Q92819 552 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 HSF4Q9ULV5 492 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 HEBP2Q9Y5Z4 205 aa12.83□□□□□ -0.36
VPS9D1-201ENST00000389386 CDC14CA4D256 554 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 OR3A4PP47883 348 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 PDLIM4P50479 330 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 RPL23AP62750 156 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 LINC00346Q8IVM7 164 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 FBXL14Q8N1E6 418 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 GPR84Q9NQS5 396 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 PADI1Q9ULC6 663 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 CFAP54Q96N23 3096 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 KIR2DL5BA0A0G2JN68 375 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 KIR2DL5BA0A0G2JPC4 375 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 ETV2O00321 342 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 DBHP09172 617 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 THEGLP0DJG4 465 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 DRD1P21728 446 aa12.82□□□□□ -0.36
VPS9D1-201ENST00000389386 EWSR1Q01844 656 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms