RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 HORMAD1Q86X24 394 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 RNF175Q8N4F7 328 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 OR52N5Q8NH56 324 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 HAVCR2Q8TDQ0 301 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 CANT1Q8WVQ1 401 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 MARC2Q969Z3 335 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 OR5B12Q96R08 314 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 FOXC2Q99958 501 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 VCXQ9H320 206 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 FNDC4Q9H6D8 234 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 SDR39U1Q9NRG7 319 aaPredicted RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 B3GNT2Q9NY97 397 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 FOXJ2Q9P0K8 574 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 RNF11Q9Y3C5 154 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 AP4S1Q9Y587 144 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 GOLGA4Q13439 2230 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 DOPEY2Q9Y3R5 2298 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 TRBV4-1A0A0J9YWV2 114 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 SNURFLB1AK76 121 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 F8W036 122 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ERI3O43414 337 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ENTPD6O75354 484 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 EDNRAP25101 427 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ZFP36P26651 326 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 AVPR1BP47901 424 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ZFP36L2P47974 494 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 POLR2JP52435 117 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 MTPNP58546 118 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 SNRPD1P62314 119 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 SLC7A9P82251 487 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 LAGE3Q14657 143 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 RAB35Q15286 201 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 LY6G5CQ5SRR4 150 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 TMEM215Q68D42 235 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 FAM131AQ6UXB0 335 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 IDO2Q6ZQW0 420 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ARPINQ7Z6K5 226 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
ERCC4-202ENST00000389138 VRK3Q8IV63 474 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 SLC22A15Q8IZD6 547 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 CLIP4Q8N3C7 705 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 DUSP18Q8NEJ0 188 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 VOPP1Q96AW1 172 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 LRRC58Q96CX6 371 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ACOT13Q9NPJ3 140 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 AIG1Q9NVV5 245 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 NUDT4Q9NZJ9 180 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 TMEM181Q9P2C4 612 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 OPTCQ9UBM4 332 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 NUBP2Q9Y5Y2 271 aa4.78□□□□□ -1.64
ERCC4-202ENST00000389138 ZNF106Q9H2Y7 1883 aaKnown RBP4.77□□□□□ -1.65
ERCC4-202ENST00000389138 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 M0QZK8 103 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 FCN1O00602 326 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 BCKDHAP12694 445 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 AKR1C4P17516 323 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 CELP19835 753 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 CCR7P32248 378 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 BLOC1S1P78537 153 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 MAPK14Q16539 360 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 DUSP5Q16690 384 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 MIDNQ504T8 468 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 GPRC6AQ5T6X5 926 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 ZFP1Q6P2D0 407 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 MBOAT2Q6ZWT7 520 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 ZNF561Q8N587 486 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 ARRDC1Q8N5I2 433 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 KRTCAP2Q8N6L1 136 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 HSD17B11Q8NBQ5 300 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 SYT8Q8NBV8 401 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 OR5AR1Q8NGP9 310 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 ZNF502Q8TBZ5 544 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 CASTOR1Q8WTX7 329 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 ZNF681Q96N22 645 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 ZNF382Q96SR6 550 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 TSC22D3Q99576 134 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 KCTD14Q9BQ13 255 aaPredicted RBP4.77□□□□□ -1.65
ERCC4-202ENST00000389138 TMEM59Q9BXS4 323 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 C3orf14Q9HBI5 128 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 SH2D2AQ9NP31 389 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 TREM2Q9NZC2 230 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 GLTPQ9NZD2 209 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 MLXQ9UH92 298 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 TMEM131Q92545 1883 aa4.77□□□□□ -1.65
ERCC4-202ENST00000389138 CENPVL1A0A0U1RR11 272 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 CENPVL3A0A0U1RRI6 287 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 A0A1W2PP18 115 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 OTOL1A6NHN0 477 aaPredicted RBP4.76□□□□□ -1.65
ERCC4-202ENST00000389138 BBIP1A8MTZ0 92 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 SOCS2O14508 198 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 CDC40O60508 579 aaKnown RBP eCLIP4.76□□□□□ -1.65
ERCC4-202ENST00000389138 WDR1O75083 606 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 PTTG1O95997 202 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 CST2P09228 141 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 FAM157CP0CG43 387 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 HLA-EP13747 358 aa4.76□□□□□ -1.65
ERCC4-202ENST00000389138 IGFBP3P17936 291 aaPredicted RBP4.76□□□□□ -1.65
ERCC4-202ENST00000389138 GSK3BP49841 420 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms