RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 TXNIPQ9H3M7 391 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ZNF665Q9H7R5 613 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 KLK11Q9UBX7 282 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 HSF4Q9ULV5 492 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ADGRB2O60241 1585 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 NDUFC2O95298 119 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 FAAP20Q6NZ36 180 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 TNFRSF13CQ96RJ3 184 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ADOQ96SZ5 270 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 AHCTF1Q8WYP5 2266 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ADAM20O43506 726 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ZFAND5O76080 213 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 FGF8P55075 233 aaPredicted RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 CLDN15P56746 228 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 RPS23P62266 143 aaKnown RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 TMEM255AQ5JRV8 349 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ADGRA1Q86SQ6 560 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 C20orf196Q8IYI0 205 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 MAP1LC3AQ9H492 121 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 SLC25A19Q9HC21 320 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 SLIT2O94813 1529 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 PDLIM5Q96HC4 596 aaKnown RBP7.86□□□□□ -1.15
LIG3-202ENST00000378526 PMELP40967 661 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 CLDN17P56750 224 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 AQP6Q13520 282 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 PRSS8Q16651 343 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 SMIM21Q3B7S5 101 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 MORN1Q5T089 497 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ZNF841Q6ZN19 808 aa7.86□□□□□ -1.15
LIG3-202ENST00000378526 ZNF646O15015 1829 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 PRSS2P07478 247 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 PRSS56P0CW18 603 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 INHBEP58166 350 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 CDK5R1Q15078 307 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TIMM23BQ5SRD1 257 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 GBGT1Q8N5D6 347 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TECPR2O15040 1411 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 YLPM1P49750 1951 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 A0A0J9YY10 115 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 SLC17A2O00624 439 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 KBTBD11O94819 623 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ESDP10768 282 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ERV3-1Q14264 604 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 Q6ZPB1 254 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 PTPMT1Q8WUK0 201 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 PP6455Q8WZ26 134 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 FBXO17Q96EF6 278 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 RNF167Q9H6Y7 350 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 C5AR2Q9P296 337 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 PXDNQ92626 1479 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 BCAT2O15382 392 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 HCRTR1O43613 425 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 KIR3DL2P43630 455 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 DUSP28Q4G0W2 176 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TNFRSF14Q92956 283 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 PIGTQ969N2 578 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 NDUFAF3Q9BU61 184 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 SLC26A1Q9H2B4 701 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 CFIP05156 583 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 PPP1CCP36873 323 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 OSR2Q8N2R0 312 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TIMD4Q96H15 378 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 EDA2RQ9HAV5 297 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TRAV8-7A0A075B6U6 113 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 SERINC4A6NH21 518 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 DDTLA6NHG4 134 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 C1orf185Q5T7R7 199 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ZNF480Q8WV37 535 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 WDR83Q9BRX9 315 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 PITX3O75364 302 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 SEMG1P04279 462 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 HSPB1P04792 205 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 ZNF250P15622 560 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 AVPR2P30518 371 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 FOXA1P55317 472 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 RPL27P61353 136 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 PPP1R1AQ13522 171 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 HERPUD1Q15011 391 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 VMA21Q3ZAQ7 101 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TNRC6AQ8NDV7 1962 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 H3BP45 60 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 MMP9P14780 707 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 RABIFP47224 123 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 CSNK1DP48730 415 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 MFAP2P55001 183 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 SLC37A1P57057 533 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ZNF260Q3ZCT1 412 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ATOH1Q92858 354 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 NEIL2Q969S2 332 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 CDCA3Q99618 268 aaPredicted RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 MRPL18Q9H0U6 180 aaKnown RBP7.85□□□□□ -1.15
LIG3-202ENST00000378526 KCNE5Q9UJ90 142 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ZNF391Q9UJN7 358 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 ZNF257Q9Y2Q1 563 aa7.85□□□□□ -1.15
LIG3-202ENST00000378526 TNS2Q63HR2 1409 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms