RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RPL7L1Q6DKI1 246 aaKnown RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 TSEN54Q7Z6J9 526 aaKnown RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 ADGRG7Q96K78 797 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 TWSG1Q9GZX9 223 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 LPAR3Q9UBY5 353 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 IGHV5-51A0A0C4DH38 117 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 A0A1W2PPH5 198 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 H3BP45 60 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 TNFSF11O14788 317 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 GCM2O75603 506 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 ADH4P08319 380 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 SLC25A4P12235 298 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 RAC1P63000 192 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ZNF528Q3MIS6 628 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ZNF468Q5VIY5 522 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 CLEC9AQ6UXN8 241 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 KLHDC1Q8N7A1 406 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 NUBPLQ8TB37 319 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 ATOH1Q92858 354 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 ALKBH3Q96Q83 286 aaPredicted RBP7.45□□□□□ -1.22
VPS36-201ENST00000378060 CTDSP1Q9GZU7 261 aa7.45□□□□□ -1.22
VPS36-201ENST00000378060 NCOR1O75376 2440 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 A0A096LPE4 126 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 A0A1W2PPZ6 126 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 TRAF3IP2O43734 574 aaPredicted RBP7.44□□□□□ -1.22
VPS36-201ENST00000378060 LSM11P83369 360 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS36-201ENST00000378060 NAAAQ02083 359 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 FAM24BQ8N5W8 94 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 GVQW1Q8N7I0 195 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 NECAP1Q8NC96 275 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 OR5C1Q8NGR4 320 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ASB5Q8WWX0 329 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ZDHHC11Q9H8X9 412 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 SLC35D1Q9NTN3 355 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 FAM96BQ9Y3D0 163 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 V9GYS6 101 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 KIAA1549LQ6ZVL6 1849 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 IGHV3-15A0A0B4J1V0 119 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ADAP1O75689 374 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 OR10J4P0C629 311 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 PAX6P26367 422 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 PPIAP62937 165 aaKnown RBP7.44□□□□□ -1.22
VPS36-201ENST00000378060 IL24Q13007 206 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 RTL8BQ17RB0 113 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 CLEC18BQ6UXF7 455 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 C6orf201Q7Z4U5 140 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ROBO4Q8WZ75 1007 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 MARVELD3Q96A59 401 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 CLDN23Q96B33 292 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 SARAFQ96BY9 339 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ZPBPQ9BS86 351 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 FAAP24Q9BTP7 215 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 FAM60AQ9NP50 221 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ANXA10Q9UJ72 324 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 MMP24Q9Y5R2 645 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 TRAV8-7A0A075B6U6 113 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 IGHV1OR21-1A0A087WYE8 117 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 C3orf85A0A1B0GTC6 90 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 AP4M1O00189 453 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 GALR2O43603 387 aaPredicted RBP7.44□□□□□ -1.22
VPS36-201ENST00000378060 HLA-DQB1P01920 261 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 ERHP84090 104 aaKnown RBP7.44□□□□□ -1.22
VPS36-201ENST00000378060 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 SMIM21Q3B7S5 101 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 LAIR2Q6ISS4 152 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 OR5B3Q8NH48 314 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 OCIAD1Q9NX40 245 aa7.44□□□□□ -1.22
VPS36-201ENST00000378060 SEC14L6B5MCN3 397 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 CRYAAP02489 173 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 IFI6P09912 130 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ZBTB25P24278 435 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR3A4PP47883 348 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 P2RY1P47900 373 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 PPP1CBP62140 327 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 PMP22Q01453 160 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 TLE1Q04724 770 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 CD226Q15762 336 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR2B11Q5JQS5 317 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR1L3Q8NH93 324 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 MTCH1Q9NZJ7 389 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ZNF230Q9UIE0 474 aaPredicted RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 ANKRD36A6QL64 1941 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 COL4A2P08572 1712 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 TCRBV16S1A1N1A0A5B0 115 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 TMEM30CPA0ZSE6 113 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 CYC1P08574 325 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 SMIM6P0DI80 62 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 SLC25A6P12236 298 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 TRA2AQ13595 282 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS36-201ENST00000378060 IL11RAQ14626 422 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ATP6V1FQ16864 119 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ZNF66Q6ZN08 573 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 OR10D4PQ8NGN7 298 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 ASB10Q8WXI3 467 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 CCDC74BQ96LY2 380 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 COMMD5Q9GZQ3 224 aa7.43□□□□□ -1.22
VPS36-201ENST00000378060 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.43□□□□□ -1.22
VPS36-201ENST00000378060 SIRT4Q9Y6E7 314 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms