RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 DHDHQ9UQ10 334 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 CAB39Q9Y376 341 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 BOLA1Q9Y3E2 137 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 IGKV1-9A0A0C4DH69 117 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 TRBV2A0A0J9YWF9 115 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 MEX3AA1L020 520 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 TMEM212A6NML5 194 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 OR4C45A6NMZ5 311 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 E9PI62 339 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 F8VVB4 439 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 F8VWA3 439 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 RNASEK-C17orf49H0YIS7 233 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 CLDN34H7C241 214 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 M0R1W7 72 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 NPFFO15130 113 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 SPRY1O43609 319 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 ANGPTL7O43827 346 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 WBP4O75554 376 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 TK1P04183 234 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 HCKP08631 526 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 CCDC159P0C7I6 412 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 BCL3P20749 454 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 COMPP49747 757 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 EDDM3BP56851 147 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 EDDM3AQ14507 147 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 NCR3LG1Q68D85 454 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 UTS2BQ765I0 119 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 MKXQ8IYA7 352 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 DHRSXQ8N5I4 330 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 SETD9Q8NE22 299 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 OR5D18Q8NGL1 313 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 TBC1D15Q8TC07 691 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 PDCD1LG2Q9BQ51 273 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 METTL8Q9H825 291 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 HES4Q9HCC6 221 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 C8orf4Q9NR00 106 aa9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 RBFOX1Q9NWB1 397 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-203ENST00000377808 IRGMA1A4Y4 181 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 MEIOCA2RUB1 952 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 BTBD17A6NE02 478 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 CHRM2P08172 466 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 FBP1P09467 338 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 CCL3L1P16619 93 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 PRKACAP17612 351 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 MYL12AP19105 171 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 OMGP23515 440 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 GABRR1P24046 479 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 COX7A1P24310 79 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 DUSP1P28562 367 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 SOX2P48431 317 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 GTF2A1P52655 376 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 MRPL28Q13084 256 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 TMPRSS11AQ6ZMR5 421 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 GDPD3Q7L5L3 318 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 Q8IYB0 196 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 PACRGLQ8N7B6 248 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 DNAAF1Q8NEP3 725 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 OR5D13Q8NGL4 314 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 SSMEM1Q8WWF3 244 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 SPSB1Q96BD6 273 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 DMRTB1Q96MA1 342 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 CHIAQ9BZP6 476 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 ZCCHC4Q9H5U6 513 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 CHCHD3Q9NX63 227 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 IL36RNQ9UBH0 155 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 GLS2Q9UI32 602 aa9.49□□□□□ -0.89
SMARCE1-203ENST00000377808 hCG_1809904A0A1W2PP81 198 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 A0A1W2PPE2 198 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 A0A1W2PR64 198 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 A0A1W2PRV1 198 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 ZFPL1O95159 310 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 HAND1O96004 215 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 IGHV4-59P01825 116 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 LIMS3P0CW19 117 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 LIMS4P0CW20 117 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 DCKP27707 260 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 NPBWR2P48146 333 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 ETV1P50549 477 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 MED21Q13503 144 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 ZNF273Q14593 569 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 OR2G6Q5TZ20 316 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 TMEM200BQ69YZ2 307 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 METAP1DQ6UB28 335 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 ZNF782Q6ZMW2 699 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 FAM58AQ8N1B3 248 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 TMEM86BQ8N661 226 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 ZSCAN4Q8NAM6 433 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 CHST6Q9GZX3 395 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 FAM234AQ9H0X4 552 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 VCXQ9H320 206 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 UNKLQ9H9P5 680 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 FGF20Q9NP95 211 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 MRPS18AQ9NVS2 196 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 GSTK1Q9Y2Q3 226 aa9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 SF3B6Q9Y3B4 125 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-203ENST00000377808 K7N7A8 449 aa9.47□□□□□ -0.89
SMARCE1-203ENST00000377808 SIRPB1O00241 398 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms