RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MKXQ8IYA7 352 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 ASCC1Q8N9N2 400 aaKnown RBP13.8□□□□□ -0.2
HMGN4-201ENST00000377575 EMG1Q92979 244 aaKnown RBP13.8□□□□□ -0.2
HMGN4-201ENST00000377575 OPALINQ96PE5 141 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 ISG20L2Q9H9L3 353 aaKnown RBP13.8□□□□□ -0.2
HMGN4-201ENST00000377575 TNFRSF19Q9NS68 423 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 C19orf12Q9NSK7 152 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 MTCH1Q9NZJ7 389 aa13.8□□□□□ -0.2
HMGN4-201ENST00000377575 IGKV1-9A0A0C4DH69 117 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 hCG_1809904A0A1W2PP81 198 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 A0A1W2PPE2 198 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 A0A1W2PR64 198 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 A0A1W2PRV1 198 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 IRGMA1A4Y4 181 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 NPFFO15130 113 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 TK1P04183 234 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 CRYBA1P05813 215 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 CHRM2P08172 466 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 POU3F4P49335 361 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 UBE2E1P51965 193 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 GBX2P52951 348 aaPredicted RBP13.79□□□□□ -0.2
HMGN4-201ENST00000377575 RPL15P61313 204 aaKnown RBP13.79□□□□□ -0.2
HMGN4-201ENST00000377575 KLRD1Q13241 179 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 LRRC36Q1X8D7 754 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 TTC23Q5W5X9 447 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 SETD9Q8NE22 299 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 OR51A4Q8NGJ6 313 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 CYGBQ8WWM9 190 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 TNFRSF14Q92956 283 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 JAM3Q9BX67 310 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 DPAGT1Q9H3H5 408 aa13.79□□□□□ -0.2
HMGN4-201ENST00000377575 TRBV2A0A0J9YWF9 115 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 BTBD17A6NE02 478 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 K7N7A8 449 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 WBP4O75554 376 aaKnown RBP13.78□□□□□ -0.2
HMGN4-201ENST00000377575 PAHP00439 452 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 PEX2P28328 305 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 COL10A1Q03692 680 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 PRB3Q04118 309 aaPredicted RBP13.78□□□□□ -0.2
HMGN4-201ENST00000377575 ACSM1Q08AH1 577 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 OR10AC1Q8NH08 325 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 OR5AK2Q8NH90 309 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 CHIAQ9BZP6 476 aa13.78□□□□□ -0.2
HMGN4-201ENST00000377575 FGF20Q9NP95 211 aaPredicted RBP13.78□□□□□ -0.2
HMGN4-201ENST00000377575 SF3B6Q9Y3B4 125 aaKnown RBP13.78□□□□□ -0.2
HMGN4-201ENST00000377575 MEIOCA2RUB1 952 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 FAM181BA6NEQ2 426 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 F8VVB4 439 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 F8VWA3 439 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 ANGPTL7O43827 346 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 INMTO95050 263 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 ZFPL1O95159 310 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 MT-ND2P03891 347 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 DCKP27707 260 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 SAA4P35542 130 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 IER3P46695 156 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 DLX1P56177 255 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 SMN1Q16637 294 aaKnown RBP13.77□□□□□ -0.21
HMGN4-201ENST00000377575 OR4M1Q8NGD0 313 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 OR13C9Q8NGT0 318 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 CNIH3Q8TBE1 160 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 TSEN15Q8WW01 171 aaKnown RBP13.77□□□□□ -0.21
HMGN4-201ENST00000377575 DYRK2Q92630 601 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 ZCCHC4Q9H5U6 513 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 ZNRD1Q9P1U0 126 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 GLS2Q9UI32 602 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 DHDHQ9UQ10 334 aa13.77□□□□□ -0.21
HMGN4-201ENST00000377575 A0A1W2PRD5 423 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 A0A1W2PRF3 423 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 A0A1W2PRM7 423 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF737O75373 536 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 CLIC3O95833 236 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 HAND1O96004 215 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 IGHV4-59P01825 116 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 LIMS3P0CW19 117 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 LIMS4P0CW20 117 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 MYL12AP19105 171 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 BCL3P20749 454 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 PDZK1IP1Q13113 114 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 IL18R1Q13478 541 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 SPIN3Q5JUX0 258 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 TMEM200BQ69YZ2 307 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 GDPD3Q7L5L3 318 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 SERPINA12Q8IW75 414 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 OR8H2Q8N162 312 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 FAM58AQ8N1B3 248 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 DHRSXQ8N5I4 330 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 OR5D14Q8NGL3 314 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 OR4F5Q8NH21 305 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 CPNE2Q96FN4 548 aaPredicted RBP13.76□□□□□ -0.21
HMGN4-201ENST00000377575 PDCD1LG2Q9BQ51 273 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 ZNF747Q9BV97 191 aa13.76□□□□□ -0.21
HMGN4-201ENST00000377575 SEBOXQ9HB31 216 aaPredicted RBP13.76□□□□□ -0.21
HMGN4-201ENST00000377575 RBFOX1Q9NWB1 397 aaKnown RBP13.76□□□□□ -0.21
HMGN4-201ENST00000377575 A0A1B0GUS0 222 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 POM121CA8CG34 1229 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 E9PI62 339 aa13.75□□□□□ -0.21
HMGN4-201ENST00000377575 SPRY1O43609 319 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms