RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 KLK10O43240 276 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 LYZP61626 148 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 GNG3P63215 75 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ARHGAP21Q5T5U3 1957 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 FGF22Q9HCT0 170 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 TMED3Q9Y3Q3 217 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 SLC25A19Q9HC21 320 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 LANCL1O43813 399 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 MYOGP15173 224 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ARRDC1Q8N5I2 433 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 MBTPS2O43462 519 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 CDAP32320 146 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 KLF3P57682 345 aaPredicted RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 HTRA3P83110 453 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 SSX1Q16384 188 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 SLC17A5Q9NRA2 495 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 FPR2P25090 351 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 TOMM34Q15785 309 aaPredicted RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 CEACAM3P40198 252 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF260Q3ZCT1 412 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 GPX7Q96SL4 187 aaPredicted RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 PLSCR3Q9NRY6 295 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 LRP12Q9Y561 859 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 A0A087X0M5 115 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 TRGV5A0A0B4J1U4 118 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 A0A1B0GX30 115 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 M0QZK8 103 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ATF1P18846 271 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ASCL1P50553 236 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 FUT7Q11130 342 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM215Q68D42 235 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ACSM5Q6NUN0 579 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 WDR74Q6RFH5 385 aaPredicted RBP11.18□□□□□ -0.62
VPS13A-204ENST00000376634 OR2D2Q9H210 308 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 ADAMTS5Q9UNA0 930 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 TRAPPC4Q9Y296 219 aa11.18□□□□□ -0.62
VPS13A-204ENST00000376634 KLKB1P03952 638 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 OR5C1Q8NGR4 320 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 FOXQ1Q9C009 403 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 DEFB108AA8MXU0 73 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 M0R3E3 92 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 SRFP11831 508 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 ST6GAL1P15907 406 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 ETV3LQ6ZN32 361 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 CA13Q8N1Q1 262 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 DEFB123Q8N688 67 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM116Q8NCL8 245 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 KLHDC9Q8NEP7 349 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 OR13G1Q8NGZ3 307 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 PHF7Q9BWX1 381 aaPredicted RBP11.17□□□□□ -0.62
VPS13A-204ENST00000376634 SLC26A1Q9H2B4 701 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
VPS13A-204ENST00000376634 RGS13O14921 159 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 BCL3P20749 454 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 DHRS13Q6UX07 377 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 IL21Q9HBE4 155 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 DOK5Q9P104 306 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 FLVCR2Q9UPI3 526 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 TTRP02766 147 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 HTN1P15515 57 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 BTG2P78543 158 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 FNDC7Q5VTL7 733 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 PAQR6Q6TCH4 344 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 TAF1LQ8IZX4 1826 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 ING1Q9UK53 422 aaPredicted RBP11.17□□□□□ -0.62
VPS13A-204ENST00000376634 GPX5O75715 221 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 TCTN3Q6NUS6 607 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 TDHQ8IZJ6 230 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 C19orf43Q9BQ61 176 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 PRO1933Q9H354 126 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 MBNL1Q9NR56 388 aaKnown RBP11.17□□□□□ -0.62
VPS13A-204ENST00000376634 CXCL13O43927 109 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 ISL1P61371 349 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 DERL3Q96Q80 235 aa11.17□□□□□ -0.62
VPS13A-204ENST00000376634 SPINK4O60575 86 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 CEACAM16Q2WEN9 425 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 FAM210BQ96KR6 192 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 TP53RKQ96S44 253 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 F2RL2O00254 374 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 ZDHHC22Q8N966 263 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 DYNLRB2Q8TF09 96 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 TMEM174Q8WUU8 243 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 SPSB1Q96BD6 273 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 MRGPRX1Q96LB2 322 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 SLC22A13Q9Y226 551 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 GCGP01275 180 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 RPLP1P05386 114 aaKnown RBP11.16□□□□□ -0.62
VPS13A-204ENST00000376634 INPP5JQ15735 1006 aaPredicted RBP11.16□□□□□ -0.62
VPS13A-204ENST00000376634 MRGPREQ86SM8 312 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 FCGR3BO75015 233 aa11.16□□□□□ -0.62
VPS13A-204ENST00000376634 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms