RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ADH4P08319 380 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 CSF3P09919 207 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 PGA5P0DJD9 388 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 PTHLHP12272 177 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 IL7P13232 177 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 SRP9P49458 86 aaKnown RBP8.85□□□□□ -0.99
PDPN-203ENST00000376061 FGF12P61328 243 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 TNFAIP6P98066 277 aaPredicted RBP8.85□□□□□ -0.99
PDPN-203ENST00000376061 DGCR2P98153 550 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 PITPNAQ00169 270 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 FAM189A2Q15884 450 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 BAK1Q16611 211 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 MST1LQ2TV78 715 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 RNASE12Q5GAN4 147 aaKnown RBP8.85□□□□□ -0.99
PDPN-203ENST00000376061 C16orf87Q6PH81 154 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 CLEC18BQ6UXF7 455 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 WDR82Q6UXN9 313 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 ZNF826PQ6ZT77 177 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 OR8H2Q8N162 312 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 Q8N402 240 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 CELF2-AS1Q8N7Q2 184 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 POC1AQ8NBT0 407 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 CLEC18CQ8NCF0 446 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 OR56B1Q8NGI3 324 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 OR51T1Q8NGJ9 327 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 OR10R2Q8NGX6 335 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 SMIM4Q8WVI0 70 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 ITLN1Q8WWA0 313 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 TRIM63Q969Q1 353 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 MRPS24Q96EL2 167 aaKnown RBP8.85□□□□□ -0.99
PDPN-203ENST00000376061 CYYR1Q96J86 154 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 AUNIPQ9H7T9 357 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 DYNLRB1Q9NP97 96 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 PCDHB16Q9NRJ7 776 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 ABCB10Q9NRK6 738 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 UFSP2Q9NUQ7 469 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 ZNF581Q9P0T4 197 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 IL36RNQ9UBH0 155 aa8.85□□□□□ -0.99
PDPN-203ENST00000376061 A0A1W2PPR1 153 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 A0A1W2PQ09 198 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 A6NNC1 897 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 B9A039 149 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 PRSS44E7EML9 344 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 HS3ST1O14792 307 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 GEMIN2O14893 280 aaKnown RBP8.84□□□□□ -0.99
PDPN-203ENST00000376061 GSTZ1O43708 216 aaPredicted RBP8.84□□□□□ -0.99
PDPN-203ENST00000376061 NOS1APO75052 506 aaPredicted RBP8.84□□□□□ -0.99
PDPN-203ENST00000376061 ACAA1P09110 424 aaPredicted RBP8.84□□□□□ -0.99
PDPN-203ENST00000376061 HIST1H1DP16402 221 aaKnown RBP8.84□□□□□ -0.99
PDPN-203ENST00000376061 TNFSF4P23510 183 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 GABRR1P24046 479 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 GATA4P43694 442 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 ERVK11-1P61568 191 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 TAF9Q16594 264 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 ZNF181Q2M3W8 571 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 NHLRC3Q5JS37 347 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 PLAC9Q5JTB6 97 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 STEAP3Q658P3 488 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 SIGIRRQ6IA17 410 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 Q8IYB0 196 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 MUC15Q8N387 334 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 EMG1Q92979 244 aaKnown RBP8.84□□□□□ -0.99
PDPN-203ENST00000376061 YIPF5Q969M3 257 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 FBXW5Q969U6 566 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 RAB3CQ96E17 227 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 DIRC2Q96SL1 478 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 ARPC5LQ9BPX5 153 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 RHOFQ9HBH0 211 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 C1orf123Q9NWV4 160 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 IL19Q9UHD0 177 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 ST3GAL6Q9Y274 331 aa8.84□□□□□ -0.99
PDPN-203ENST00000376061 TENM4Q6N022 2769 aa8.83□□□□□ -1
PDPN-203ENST00000376061 LRBAP50851 2863 aa8.83□□□□□ -1
PDPN-203ENST00000376061 hCG_1807616A0A1W2PRN6 198 aa8.83□□□□□ -1
PDPN-203ENST00000376061 MEIOCA2RUB1 952 aa8.83□□□□□ -1
PDPN-203ENST00000376061 TMEM235A6NFC5 223 aa8.83□□□□□ -1
PDPN-203ENST00000376061 GABARAPH6UMI1 98 aa8.83□□□□□ -1
PDPN-203ENST00000376061 MFNGO00587 321 aa8.83□□□□□ -1
PDPN-203ENST00000376061 AKR7A2O43488 359 aa8.83□□□□□ -1
PDPN-203ENST00000376061 LANCL1O43813 399 aa8.83□□□□□ -1
PDPN-203ENST00000376061 UTP20O75691 2785 aaKnown RBP8.83□□□□□ -1
PDPN-203ENST00000376061 NXPH2O95156 264 aa8.83□□□□□ -1
PDPN-203ENST00000376061 GOSR1O95249 250 aa8.83□□□□□ -1
PDPN-203ENST00000376061 GNB3P16520 340 aa8.83□□□□□ -1
PDPN-203ENST00000376061 PRKACAP17612 351 aa8.83□□□□□ -1
PDPN-203ENST00000376061 CHATP28329 748 aa8.83□□□□□ -1
PDPN-203ENST00000376061 BLVRBP30043 206 aaPredicted RBP8.83□□□□□ -1
PDPN-203ENST00000376061 PMELP40967 661 aa8.83□□□□□ -1
PDPN-203ENST00000376061 SNU13P55769 128 aaKnown RBP8.83□□□□□ -1
PDPN-203ENST00000376061 TMEM50BP56557 158 aa8.83□□□□□ -1
PDPN-203ENST00000376061 SNRPD2P62316 118 aaKnown RBP8.83□□□□□ -1
PDPN-203ENST00000376061 MRPS10P82664 201 aaKnown RBP8.83□□□□□ -1
PDPN-203ENST00000376061 HOXA4Q00056 320 aaPredicted RBP8.83□□□□□ -1
PDPN-203ENST00000376061 GUCA2AQ02747 115 aa8.83□□□□□ -1
PDPN-203ENST00000376061 SPTAN1Q13813 2472 aaKnown RBP8.83□□□□□ -1
PDPN-203ENST00000376061 TESK1Q15569 626 aa8.83□□□□□ -1
PDPN-203ENST00000376061 ZNF260Q3ZCT1 412 aa8.83□□□□□ -1
PDPN-203ENST00000376061 FAM209AQ5JX71 171 aa8.83□□□□□ -1
PDPN-203ENST00000376061 TRIQKQ629K1 86 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms