RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PPP1R1CQ8WVI7 109 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 ZNF414Q96IQ9 312 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 GATA5Q9BWX5 397 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 MRPS17Q9Y2R5 130 aaKnown RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 CTSVO60911 334 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 MAPTP10636 758 aaKnown RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 SRFP11831 508 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 SPNP16150 400 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 PRDX1Q06830 199 aaKnown RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 OR2L13Q8N349 312 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 TMEM126AQ9H061 195 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 CD84Q9UIB8 345 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 CLASP1Q7Z460 1538 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 HOXB3P14651 431 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 BACE1P56817 501 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 DUX4L9Q6RFH8 374 aaPredicted RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 GLRX5Q86SX6 157 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 GBGT1Q8N5D6 347 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 NDUFAF3Q9BU61 184 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 QTRT1Q9BXR0 403 aaKnown RBP5.36□□□□□ -1.55
SCN2A-202ENST00000375427 OR51B2Q9Y5P1 312 aa5.36□□□□□ -1.55
SCN2A-202ENST00000375427 CD22P20273 847 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 PCBP1Q15365 356 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 NPNTQ6UXI9 565 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 C19orf24Q9BVV8 132 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SLC17A9Q9BYT1 436 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SLC2A11Q9BYW1 496 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SLC6A13Q9NSD5 602 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 FAM198AQ9UFP1 575 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 DUSP13Q9UII6 198 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 CDK13Q14004 1512 aaKnown RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TRAV9-1A0A075B6T8 112 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 YDJCA8MPS7 323 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 NPIPB8E9PQR5 432 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 NPIPB9F8W1W9 429 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 NPIPB7O75200 414 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 FGF2P09038 288 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TACR2P21452 398 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 HSPE1P61604 102 aaKnown RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 AWAT1Q58HT5 328 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 PP6455Q8WZ26 134 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 C2orf50Q96LR7 162 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SS18L2Q9UHA2 77 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TMEM2Q9UHN6 1383 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 DENND4BO75064 1496 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 H3BTX0 84 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 WNT9AO14904 365 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 CD3DP04234 171 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 EFNB2P52799 333 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 GNB2P62879 340 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RTP5Q14D33 572 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 LRRC26Q2I0M4 334 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TMEM139Q8IV31 216 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 NAXDQ8IW45 347 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RNF182Q8N6D2 247 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 IL17REQ8NFR9 667 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 G6PC2Q9NQR9 355 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TMED3Q9Y3Q3 217 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RNF222A6NCQ9 220 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 FOXE1O00358 373 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 FRS3O43559 492 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TOMM40O96008 361 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 GPX3P22352 226 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 AMER3Q8N944 861 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ATP6V0BQ99437 205 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SDR39U1Q9NRG7 319 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TDRD15B5MCY1 1934 aaKnown RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RAPGEF6Q8TEU7 1601 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SLC17A2O00624 439 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 KLK10O43240 276 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 CFDP00746 253 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 HRH2P25021 359 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 HOXA6P31267 233 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 UFM1P61960 85 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 IL13RA2Q14627 380 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 AAED1Q7RTV5 226 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ATP5L2Q7Z4Y8 100 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SPICQ8N5J4 248 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 DNERQ8NFT8 737 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 EAF2Q96CJ1 260 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 MRPS24Q96EL2 167 aaKnown RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 PAXXQ9BUH6 204 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SH3BGRL3Q9H299 93 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 USF3Q68DE3 2245 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TCOF1Q13428 1488 aaKnown RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 TRAV9-2A0A087WT02 112 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SMIM28A0A1B0GU29 152 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 hADV38S2A0JD32 116 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SH2D1BO14796 132 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RER1O15258 196 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 SS18L1O75177 396 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ICAM2P13598 275 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ATP1B2P14415 290 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-202ENST00000375427 NXPH1P58417 271 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 ECSCRQ19T08 205 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 FAM57BQ71RH2 274 aa5.35□□□□□ -1.55
SCN2A-202ENST00000375427 RTN4RL2Q86UN3 420 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms