RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 OR10J4P0C629 311 aa10.22□□□□□ -0.77
PTCH1-203ENST00000375274 PRSS12P56730 875 aa10.22□□□□□ -0.77
PTCH1-203ENST00000375274 DEFB108BQ8NET1 73 aa10.22□□□□□ -0.77
PTCH1-203ENST00000375274 FAM210BQ96KR6 192 aa10.22□□□□□ -0.77
PTCH1-203ENST00000375274 PCED1AQ9H1Q7 454 aa10.22□□□□□ -0.77
PTCH1-203ENST00000375274 COL11A1P12107 1806 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF638Q14966 1978 aaKnown RBP10.22□□□□□ -0.77
PTCH1-203ENST00000375274 ASXL3Q9C0F0 2248 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 C7orf77A4D0Y5 90 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 LIPT2A6NK58 231 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 AP4M1O00189 453 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 GPR37O15354 613 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 DAOP14920 347 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 CALCRP30988 508 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 CRYBA2P53672 197 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 OR2A2Q6IF42 318 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 SLC26A10Q8NG04 563 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF251Q9BRH9 671 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 UCK1Q9HA47 277 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 TAF1LQ8IZX4 1826 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 MAP1LC3B2A6NCE7 125 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 BGLAPP02818 100 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 PATE4P0C8F1 98 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 GALNSP34059 522 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 KIR2DL1P43626 348 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-203ENST00000375274 RPS4XP62701 263 aaKnown RBP10.21□□□□□ -0.77
PTCH1-203ENST00000375274 RAC1P63000 192 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 SIGLECL1Q8N7X8 197 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 CADM4Q8NFZ8 388 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 SLC25A38Q96DW6 304 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 S1PR3Q99500 378 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 NPAS1Q99742 590 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 TPPP3Q9BW30 176 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 MAP1LC3BQ9GZQ8 125 aa10.21□□□□□ -0.77
PTCH1-203ENST00000375274 A0A1W2PPH5 198 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 NKX6-3A6NJ46 265 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 IGKV1D-16P01601 117 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 CRYBA1P05813 215 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 CD200P41217 278 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 KIR3DL2P43630 455 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 SUB1P53999 127 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 MOGAT2Q3SYC2 334 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 AARDQ4LEZ3 155 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 PABPC1L2AQ5JQF8 200 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 RHBDD2Q6NTF9 364 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 ADAD2Q8NCV1 583 aaKnown RBP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 PTPMT1Q8WUK0 201 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 FOXS1O43638 330 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 MPGP29372 298 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 LSM6P62312 80 aaKnown RBP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 TMEM267Q0VDI3 215 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 SMAD4Q13485 552 aaKnown RBP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 ZNF660Q6AZW8 331 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-203ENST00000375274 VASH2Q86V25 355 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 FAM181AQ8N9Y4 354 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 OR5B3Q8NH48 314 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 RAB33BQ9H082 229 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 ZFP64Q9NPA5 681 aa10.21□□□□□ -0.78
PTCH1-203ENST00000375274 LRRC30A6NM36 301 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 TRAF3IP2O43734 574 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 SPP1P10451 314 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 ZNF718Q3SXZ3 478 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 GUSBP11Q6P575 273 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 SCCPDHQ8NBX0 429 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 IP6K3Q96PC2 410 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 RSRP1Q9BUV0 290 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 SARGQ9BW04 601 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 CACNG5Q9UF02 275 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 VSIG4Q9Y279 399 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 MRPS18BQ9Y676 258 aaKnown RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 COL11A2P13942 1736 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 GREB1LQ9C091 1923 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 ZNF98A6NK75 572 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 H0Y8G0 127 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 CRYAAP02489 173 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 FOSL1P15407 271 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 SSTP61278 116 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 PPP1CBP62140 327 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 ZNF273Q14593 569 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 TMEM241Q24JQ0 296 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 LIAT1Q6ZQX7 453 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 MRPL24Q96A35 216 aaKnown RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 PTX4Q96A99 478 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 ADAT3Q96EY9 351 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 TAAR6Q96RI8 345 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 A0A1W2PPC1 479 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 HLA-DRB3P79483 266 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 OVCH2Q7RTZ1 564 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 KDF1Q8NAX2 398 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-203ENST00000375274 LOXL2Q9Y4K0 774 aa10.2□□□□□ -0.78
PTCH1-203ENST00000375274 hCG_1809904A0A1W2PP81 198 aa10.19□□□□□ -0.78
PTCH1-203ENST00000375274 A0A1W2PR64 198 aa10.19□□□□□ -0.78
PTCH1-203ENST00000375274 A0A1W2PRV1 198 aa10.19□□□□□ -0.78
PTCH1-203ENST00000375274 OR2M5A3KFT3 312 aa10.19□□□□□ -0.78
PTCH1-203ENST00000375274 ABCD4O14678 606 aa10.19□□□□□ -0.78
PTCH1-203ENST00000375274 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms