RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 DHRS2Q13268 280 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 SLC25A30Q5SVS4 291 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 OR10C1Q96KK4 312 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 WDFY2Q96P53 400 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 RHNO1Q9BSD3 238 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 ZMIZ1Q9ULJ6 1067 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 KCNE1BA0A087WTH5 132 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 WNT1P04628 370 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 CD3EP07766 207 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 IL24Q13007 206 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 CTF1Q16619 201 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 MRM1Q6IN84 353 aaKnown RBP10.26□□□□□ -0.77
VCL-202ENST00000372755 PRSS54Q6PEW0 395 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 PDPNQ86YL7 162 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 NPAS1Q99742 590 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 MANBALQ9NQG1 85 aa10.26□□□□□ -0.77
VCL-202ENST00000372755 IGHV1OR21-1A0A087WYE8 117 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 DUXBA0A1W2PPF3 345 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 SERTM1A2A2V5 107 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 FAM24AA6NFZ4 105 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 PRR35P0CG20 571 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 BCL3P20749 454 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 TNXAQ16473 311 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 DHRS13Q6UX07 377 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 PHYHIPLQ96FC7 376 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 GABRA1P14867 456 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 HERVK_113P61574 105 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 RAB32Q13637 225 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 PET117Q6UWS5 81 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 RNF165Q6ZSG1 346 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 OR4D9Q8NGE8 314 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 PLSCR3Q9NRY6 295 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 TECRQ9NZ01 308 aaKnown RBP10.25□□□□□ -0.77
VCL-202ENST00000372755 MMP24Q9Y5R2 645 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 C5P01031 1676 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 IGHV3-43A0A0B4J1X8 118 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 PLPP3O14495 311 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 IGHV3-43DP0DP04 118 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 RPS4Y1P22090 263 aaKnown RBP10.25□□□□□ -0.77
VCL-202ENST00000372755 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 TMEM116Q8NCL8 245 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 OR8B3Q8NGG8 313 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 MRGPRDQ8TDS7 321 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 GPBAR1Q8TDU6 330 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 MS4A10Q96PG2 267 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 OR8B2Q96RD0 313 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 OR3A1P47881 315 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 ZNF793Q6ZN11 406 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 TMPRSS13Q9BYE2 586 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 PPM1DO15297 605 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 MBPP02686 304 aaPredicted RBP10.25□□□□□ -0.77
VCL-202ENST00000372755 IGFBP6P24592 240 aaPredicted RBP10.25□□□□□ -0.77
VCL-202ENST00000372755 ZNF141Q15928 474 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 COX19Q49B96 90 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 FDX2Q6P4F2 183 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 MUC20Q8N307 709 aaPredicted RBP10.25□□□□□ -0.77
VCL-202ENST00000372755 OR4A4PQ8NGN8 299 aa10.25□□□□□ -0.77
VCL-202ENST00000372755 SSC5DA1L4H1 1573 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 RGS13O14921 159 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 ZNF207O43670 478 aaKnown RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 SOX15O60248 233 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 SPINK4O60575 86 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 SH2D5Q6ZV89 423 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 DOK5Q9P104 306 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 OR5V1Q9UGF6 321 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 IGHV5-51A0A0C4DH38 117 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 A0A1B0GTL3 188 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 ZFPL1O95159 310 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 ORM2P19652 201 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 UBE2L3P68036 154 aaKnown RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 ZXDAP98168 799 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 TIAL1Q01085 375 aaKnown RBP eCLIP10.24□□□□□ -0.77
VCL-202ENST00000372755 ANKRD55Q3KP44 614 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 CD300LDQ6UXZ3 194 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 BHLHA15Q7RTS1 189 aaPredicted RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 ZNF784Q8NCA9 323 aaPredicted RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 OR10D4PQ8NGN7 298 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 OR1B1Q8NGR6 318 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 FAM210BQ96KR6 192 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 LYZL6O75951 148 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 HLA-GP17693 338 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 PRSS42Q7Z5A4 293 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 DEFB124Q8NES8 71 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 OR4D10Q8NGI6 311 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 OR5AC1P0C628 307 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 MRPS11P82912 194 aaKnown RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 HYAL1Q12794 435 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 ST3GAL2Q16842 350 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 WDR34Q96EX3 536 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 SLC25A22Q9H936 323 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 C1RLQ9NZP8 487 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 CHD4Q14839 1912 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 IGLV3-16A0A075B6K0 115 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 F2RL2O00254 374 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 MPC2O95563 127 aa10.24□□□□□ -0.77
VCL-202ENST00000372755 CTSDP07339 412 aaPredicted RBP10.24□□□□□ -0.77
VCL-202ENST00000372755 CRYBB2P43320 205 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms