RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ZDHHC22Q8N966 263 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 OR51A2Q8NGJ7 313 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 ABHD3Q8WU67 409 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 PATE1Q8WXA2 126 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 FAM3CQ92520 227 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 TVP23CQ96ET8 276 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 HIST1H2AAQ96QV6 131 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 LPAR4Q99677 370 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 SRD5A3Q9H8P0 318 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 MTHFD2LQ9H903 347 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-203ENST00000372232 KLHL28Q9NXS3 571 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF107Q9UII5 783 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CD207Q9UJ71 328 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 MRPS2Q9Y399 296 aaKnown RBP7.78□□□□□ -1.16
ATG4A-203ENST00000372232 SIT1Q9Y3P8 196 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 COX11Q9Y6N1 276 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 TRAV30A0A087WSZ9 112 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 C13orf42A0A1B0GVH6 325 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SERTM2A0A1B0GWG4 89 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MEIS3P1A6NDR6 274 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ZNF860A6NHJ4 632 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 OR4C45A6NMZ5 311 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 C10orf142B7Z368 130 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 H0YGG7 62 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 CTAG2O75638 210 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SEMA4FO95754 770 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 PVRP15151 417 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 FUT3P21217 361 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 UCP3P55916 312 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 CLDN18P56856 261 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ARF3P61204 181 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 PRDX4Q13162 271 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 FBLN7Q53RD9 439 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 RTL6Q6ICC9 239 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 RPL22L1Q6P5R6 122 aaKnown RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 OPN5Q6U736 354 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SHISA2Q6UWI4 295 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TEX43Q6ZNM6 134 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SYS1Q8N2H4 156 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 STPG4Q8N801 248 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 COX18Q8N8Q8 333 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SMRP1Q8NCR6 262 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ZNF738Q8NE65 137 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SLC26A10Q8NG04 563 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 CPT1CQ8TCG5 803 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 RERGQ96A58 199 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MOB3AQ96BX8 217 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 CTHRC1Q96CG8 243 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 BPIFA2Q96DR5 249 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 PELI1Q96FA3 418 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TBX15Q96SF7 602 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MRPL13Q9BYD1 178 aaKnown RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TPSD1Q9BZJ3 242 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MED20Q9H944 212 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 LYRM4Q9HD34 91 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ST3GAL6Q9Y274 331 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SIGLEC7Q9Y286 467 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 STRAPQ9Y3F4 350 aaKnown RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 RNF115Q9Y4L5 304 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ENTPD2Q9Y5L3 495 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MRPS18BQ9Y676 258 aaKnown RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 M0QYG6 137 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 WDR1O75083 606 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TNFP01375 233 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 THY1P04216 161 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 IGHV4-34P06331 123 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SEC11BP0C7V7 166 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SIRPAP78324 504 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ID2Q02363 134 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ELOCQ15369 112 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 PRSS8Q16651 343 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ARHGAP11BQ3KRB8 267 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TRMT12Q53H54 448 aaKnown RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 FHL5Q5TD97 284 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 PRSS41Q7RTY9 318 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 S100A7AQ86SG5 101 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SFTPA2Q8IWL1 248 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SHISA5Q8N114 240 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 KDM8Q8N371 416 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ZNF563Q8TA94 476 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SLC2A12Q8TD20 617 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 TMEM234Q8WY98 164 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SDF2Q99470 211 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MKKSQ9NPJ1 570 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 HRASLS2Q9NWW9 162 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 CLEC5AQ9NY25 188 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 MMP17Q9ULZ9 603 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 C19orf53Q9UNZ5 99 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 ZNF443Q9Y2A4 671 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-203ENST00000372232 WDR45Q9Y484 360 aa7.77□□□□□ -1.17
ATG4A-203ENST00000372232 SCN3AQ9NY46 2000 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 TMEM265A0A087WTH1 108 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 TRBV2A0A0J9YWF9 115 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 SHISA7A6NL88 538 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 C9orf172C9J069 976 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 H0YL77 283 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 BHLHE40O14503 412 aa7.76□□□□□ -1.17
ATG4A-203ENST00000372232 LDB3O75112 727 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms