RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 LINC00862A6NCI5 91 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 EIF4E2O60573 245 aaKnown RBP12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 NDUFB7P17568 137 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 PABPC1L2AQ5JQF8 200 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 GDF7Q7Z4P5 450 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 TAAR6Q96RI8 345 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
RAPGEF1-202ENST00000372190 BRS3P32247 399 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 GLCCI1Q86VQ1 547 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR52B4Q8NGK2 314 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 SLC25A43Q8WUT9 341 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 MANBALQ9NQG1 85 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 PRSS50Q9UI38 385 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 GON4LQ3T8J9 2241 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 TRBV23-1A0A0A0MS06 115 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 TCL1AP56279 114 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 RTL8BQ17RB0 113 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 ACSM6Q6P461 480 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 BOD1Q96IK1 185 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 MAGT1Q9H0U3 335 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 CDC42EP3Q9UKI2 254 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 H7C1C5 153 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 APCSP02743 223 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR5AC1P0C628 307 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 ACVR1Q04771 509 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 RIGQ13278 110 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 CLN3Q13286 438 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 DUSP18Q8NEJ0 188 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 CORINQ9Y5Q5 1042 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 SOD1P00441 154 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 GPX2P18283 190 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 XKR7Q5GH72 579 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 DLEU7Q6UYE1 221 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 D2HGDHQ8N465 521 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
RAPGEF1-202ENST00000372190 MFNGO00587 321 aa12.58□□□□□ -0.39
RAPGEF1-202ENST00000372190 APOBEC1P41238 236 aaKnown RBP12.58□□□□□ -0.39
RAPGEF1-202ENST00000372190 SEZ6L2Q6UXD5 910 aa12.58□□□□□ -0.39
RAPGEF1-202ENST00000372190 SIGMAR1Q99720 223 aa12.58□□□□□ -0.39
RAPGEF1-202ENST00000372190 TMEM215Q68D42 235 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 DPY19L2P2Q6ZN68 376 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR1L4Q8NGR5 311 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 MARCH1Q8TCQ1 289 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 PTP4A1Q93096 173 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 GAL3ST2Q9H3Q3 398 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 FKBP2P26885 142 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 TEAD1P28347 426 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 RHOBP62745 196 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 FAM53BQ14153 422 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 FAM74A3Q4VXF1 159 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 TRMT12Q53H54 448 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 SPRED2Q7Z698 418 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZDHHC22Q8N966 263 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 UBE2FQ969M7 185 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 CGGBP1Q9UFW8 167 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 KCNK7Q9Y2U2 307 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 CXorf65A6NEN9 183 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 FGF17O60258 216 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 IHHQ14623 411 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 BCORP1Q8N888 145 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 GDF15Q99988 308 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 CD3DP04234 171 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 RNF167Q9H6Y7 350 aa12.58□□□□□ -0.4
RAPGEF1-202ENST00000372190 DHRS3O75911 302 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 ACTL6AO96019 429 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR8B8Q15620 311 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMEM207Q6UWW9 146 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 HIST1H4GQ99525 98 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 ATP23Q9Y6H3 246 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 GPX5O75715 221 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 CD22P20273 847 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 ARR3P36575 388 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 FAM3BP58499 235 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 PLPPR5Q32ZL2 321 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 MRPS16Q9Y3D3 137 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 MICAL3Q7RTP6 2002 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 CASP8AP2Q9UKL3 1982 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 HMX2A2RU54 273 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 MASP2O00187 686 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 SOD3P08294 240 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMEM128Q5BJH2 165 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR4D9Q8NGE8 314 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMEM230Q96A57 120 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 IL4P05112 153 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 GPNMBQ14956 572 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 SSX8Q7RTT4 187 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMEM229BQ8NBD8 167 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR2Y1Q8NGV0 311 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 PIGTQ969N2 578 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 CNTD2Q9H8S5 307 aa12.57□□□□□ -0.4
RAPGEF1-202ENST00000372190 GNG7O60262 68 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms