RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CA1P00915 261 aaPredicted RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 IGF2P01344 180 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF137PP52743 207 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 HIST1H1BP16401 226 aaKnown RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 MRPL58Q14197 206 aaKnown RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 DEFB115Q30KQ5 88 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF260Q3ZCT1 412 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 ANKRD10Q9NXR5 420 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 EIF3GO75821 320 aaKnown RBP eCLIP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM33P57088 247 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 PLA1AQ53H76 456 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 LINC00469Q8N7U9 141 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 LRRC75AQ8NAA5 344 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 ALG14Q96F25 216 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 TAAR2Q9P1P5 351 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 CEACAM6P40199 344 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 AQP6Q13520 282 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 CCL14Q16627 93 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 TAF1P21675 1872 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 HLA-GP17693 338 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 ZNF750Q32MQ0 723 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 ALKBH6Q3KRA9 238 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 C11orf40Q8WZ69 217 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 RAB33BQ9H082 229 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 FCGR3AP08637 254 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM25Q86YD3 366 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 PELI1Q96FA3 418 aa13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 HINT3Q9NQE9 182 aaKnown RBP13.76□□□□□ -0.21
GTF3C4-201ENST00000372146 FAM74A7A6NL05 159 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 SELENOPP49908 381 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 NKAIN4Q8IVV8 208 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 CMC2Q9NRP2 79 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM272A0A1B0GTI8 110 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 LYZP61626 148 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 RPEQ96AT9 228 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 ANXA10Q9UJ72 324 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 PSMG3Q9BT73 122 aaPredicted RBP13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 ADAMTS5Q9UNA0 930 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 PAFAH1B2P68402 229 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 RAXQ9Y2V3 346 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM95Q3KNT9 176 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 TMEM56Q96MV1 263 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 C1QTNF6Q9BXI9 259 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 ONECUT1Q9UBC0 465 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 H3BNC9 293 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 CRYAAP02489 173 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 MBPP02686 304 aaPredicted RBP13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 SRP14P37108 136 aaKnown RBP13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 CDK5R1Q15078 307 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 MOB3BQ86TA1 216 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 COPS9Q8WXC6 57 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 SCN11AQ9UI33 1791 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 KIR2DS5A0A0G2JLQ3 304 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 A0A0G2JNG1 304 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 KIR2DS3K7RE56 304 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 ACTL6AO96019 429 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 KIR2DS5Q14953 304 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 PELI3Q8N2H9 469 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 DERL1Q9BUN8 251 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 SFXN1Q9H9B4 322 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 VAX2Q9UIW0 290 aa13.75□□□□□ -0.21
GTF3C4-201ENST00000372146 M0R082 166 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 SMAD6O43541 496 aaKnown RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 SMIM13P0DJ93 91 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 COL19A1Q14993 1142 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 GMPPAQ96IJ6 420 aaPredicted RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ABHD14AQ9BUJ0 271 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 TEX101Q9BY14 249 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 COL14A1Q05707 1796 aaKnown RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 FAM157BP0CG42 384 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 JOSD1Q15040 202 aaPredicted RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 PRSS8Q16651 343 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 TM4SF18Q96CE8 201 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ORAI1Q96D31 301 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 JAM3Q9BX67 310 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 SLIRPQ9GZT3 109 aaKnown RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 C3orf85A0A1B0GTC6 90 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 STPG2Q8N412 459 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 HMGN4O00479 90 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 LRRTM3Q86VH5 581 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ARRDC1Q8N5I2 433 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 OR8B3Q8NGG8 313 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 ALKBH7Q9BT30 221 aaPredicted RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 CYSLTR2Q9NS75 346 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 A0A096LPE4 126 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 A0A1W2PPZ6 126 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 SLC25A26Q70HW3 274 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 CBARPQ8N350 705 aaPredicted RBP13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
GTF3C4-201ENST00000372146 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms