RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NBASA2RRP1 2371 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 CADP27708 2225 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 IGLV3-9A0A075B6K5 115 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 SSX5O60225 188 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 SLC22A25Q6T423 547 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 C6orf201Q7Z4U5 140 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 Q8IYB0 196 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 GALNT11Q8NCW6 608 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 NUBP2Q9Y5Y2 271 aa22.38■■□□□ 1.17
ATPAF1-202ENST00000371937 NKX2-6A6NCS4 301 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 ZNF736B4DX44 427 aaPredicted RBP22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 H3BUI4 141 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 CD3DP04234 171 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 TCRBP04435 133 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 CHATP28329 748 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 LRP11Q86VZ4 500 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 OR4C16Q8NGL9 310 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 PRR7Q8TB68 274 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 OCSTAMPQ9BR26 566 aa22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 ESRP2Q9H6T0 727 aaKnown RBP22.37■■□□□ 1.17
ATPAF1-202ENST00000371937 PLSCR5A0PG75 271 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 TPD52L2O43399 206 aaKnown RBP22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 GRPP07492 148 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 CCR6P51684 374 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 SORDQ00796 357 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 SFRP4Q6FHJ7 346 aaPredicted RBP22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 CADM3Q8N126 398 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 UPRTQ96BW1 309 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 F8VVB4 439 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 F8VWA3 439 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 PDCD6O75340 191 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 FCER2P06734 321 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 IGFBP7Q16270 282 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 LINC00596Q86U02 117 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 BATF2Q8N1L9 274 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 SYT3Q9BQG1 590 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 CA10Q9NS85 328 aa22.36■■□□□ 1.17
ATPAF1-202ENST00000371937 F5H5P2 479 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 ATXN7O15265 892 aaPredicted RBP22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 RHBDL1O75783 438 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 OR7C1O76099 320 aaPredicted RBP22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 ACAA1P09110 424 aaPredicted RBP22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 FUT3P21217 361 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 MPV17LQ2QL34 196 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 FAM58AQ8N1B3 248 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 GVQW1Q8N7I0 195 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 ESPL1Q14674 2120 aa22.35■■□□□ 1.17
ATPAF1-202ENST00000371937 INMT-MINDY4F8WBC2 141 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 CDIPTO14735 213 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 KALRNO60229 2985 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 RAB3DO95716 219 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 CD74P04233 296 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 PRKACAP17612 351 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 TBPP20226 339 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 HLA-DMAP28067 261 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 FAAP20Q6NZ36 180 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 MRPL24Q96A35 216 aaKnown RBP22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 ZNF442Q9H7R0 627 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 NUDT15Q9NV35 164 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 ANAPC10Q9UM13 185 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 PMELP40967 661 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 MRPS15P82914 257 aaKnown RBP22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 MAB21L1Q13394 359 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 C4orf17Q53FE4 359 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 ZNF782Q6ZMW2 699 aaPredicted RBP22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 BTN2A1Q7KYR7 527 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 OR2Z1Q8NG97 314 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 EMG1Q92979 244 aaKnown RBP22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 ZNF488Q96MN9 340 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 FAAP24Q9BTP7 215 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 MRPL37Q9BZE1 423 aaKnown RBP22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 TLNRD1Q9H1K6 362 aa22.34■■□□□ 1.17
ATPAF1-202ENST00000371937 VSTM5A8MXK1 200 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 PGA5P0DJD9 388 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 NAT1P18440 290 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 BTG1P62324 171 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 MEF2DQ14814 521 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 OR4D10Q8NGI6 311 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 FBXW5Q969U6 566 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 TAAR3PQ9P1P4 343 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 PLEKHA6Q9Y2H5 1048 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 ATP23Q9Y6H3 246 aa22.33■■□□□ 1.16
ATPAF1-202ENST00000371937 USP24Q9UPU5 2620 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 IL13RA2Q14627 380 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 ST3GAL2Q16842 350 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 NCMAPQ5T1S8 102 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 OR4S1Q8NGB4 309 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 HS3ST6Q96QI5 342 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 ZNF581Q9P0T4 197 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 POU2F3Q9UKI9 436 aa22.32■■□□□ 1.16
ATPAF1-202ENST00000371937 CD200P41217 278 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 SNU13P55769 128 aaKnown RBP22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 RAG2P55895 527 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 ERVK11-1P61568 191 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 RNASE10Q5GAN6 216 aaKnown RBP22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 ATAD3CQ5T2N8 411 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 CNTNAP3BQ96NU0 1288 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 NRIP2Q9BQI9 281 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 SULT4A1Q9BR01 284 aa22.31■■□□□ 1.16
ATPAF1-202ENST00000371937 CNTNAP3Q9BZ76 1288 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms