RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LBX1P52954 281 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 PRDX4Q13162 271 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 PP6455Q8WZ26 134 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 RHNO1Q9BSD3 238 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 SEBOXQ9HB31 216 aaPredicted RBP13.72□□□□□ -0.21
COL5A1-201ENST00000371817 HIST1H1EP10412 219 aaKnown RBP13.72□□□□□ -0.21
COL5A1-201ENST00000371817 OR52N5Q8NH56 324 aa13.72□□□□□ -0.21
COL5A1-201ENST00000371817 SOD3P08294 240 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 KHDC1LQ5JSQ8 128 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 C11orf40Q8WZ69 217 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 NOTCH3Q9UM47 2321 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 C3orf85A0A1B0GTC6 90 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 COL8A1P27658 744 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF273Q14593 569 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 PPT2Q9UMR5 302 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF646O15015 1829 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 ZBTB42B2RXF5 422 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 IGF2P01344 180 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 METAP1P53582 386 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 PLPPR5Q32ZL2 321 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 TMEFF1Q8IYR6 380 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF142P52746 1687 aaPredicted RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 PLPP1O14494 284 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 SKP2Q13309 424 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 SHBQ15464 509 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 ZCCHC14Q8WYQ9 949 aaKnown RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 PELI1Q96FA3 418 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 TECRQ9NZ01 308 aaKnown RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 PSG11Q9UQ72 335 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 EIF4E2O60573 245 aaKnown RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 TCTN3Q6NUS6 607 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 MRPL54Q6P161 138 aaKnown RBP13.71□□□□□ -0.21
COL5A1-201ENST00000371817 SLC25A26Q70HW3 274 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 OR1P1Q8NH06 330 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.21
COL5A1-201ENST00000371817 RBP4P02753 201 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 RBPJQ06330 500 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 SDF2Q99470 211 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.22
COL5A1-201ENST00000371817 RBM38Q9H0Z9 239 aaKnown RBP13.71□□□□□ -0.22
COL5A1-201ENST00000371817 LYRM4Q9HD34 91 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 CACNG5Q9UF02 275 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 MS4A18H0YCH9 400 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 CTAG2O75638 210 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 GJB3O75712 270 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 CEBPBP17676 345 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 ARF6P62330 175 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF345Q14585 488 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 MS4A18Q3C1V0 323 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 NIT1Q86X76 327 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.71□□□□□ -0.22
COL5A1-201ENST00000371817 COPS9Q8WXC6 57 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 EPHX3Q9H6B9 360 aa13.71□□□□□ -0.22
COL5A1-201ENST00000371817 FUT6P51993 359 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 SLCO1C1Q9NYB5 712 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 SLCO2B1O94956 709 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 GOSR1O95249 250 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 CD1BP29016 333 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 P2RY1P47900 373 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 TAZQ16635 292 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 NTMQ9P121 344 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 VAMP5O95183 116 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 LIAT1Q6ZQX7 453 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 SLC25A37Q9NYZ2 338 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 CSNK1DP48730 415 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM215Q68D42 235 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 MISP3Q96FF7 219 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 ZC3HAV1LQ96H79 300 aaKnown RBP13.7□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF506Q5JVG8 444 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 SLC25A34Q6PIV7 304 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 ACTL6AO96019 429 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 ANKRD34AQ69YU3 496 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 SLC39A5Q6ZMH5 540 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 TMEM183AQ8IXX5 376 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 OPN3Q9H1Y3 402 aaPredicted RBP13.7□□□□□ -0.22
COL5A1-201ENST00000371817 CDC42EP3Q9UKI2 254 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 RGPD5Q99666 1765 aa13.7□□□□□ -0.22
COL5A1-201ENST00000371817 PRRX1P54821 245 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 CST9Q5W186 159 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 GUCD1Q96NT3 240 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 OPN4Q9UHM6 478 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 MDH2P40926 338 aaKnown RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 RUNX3Q13761 415 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 KHDC3LQ587J8 217 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 PIK3IP1Q96FE7 263 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 ADTRPQ96IZ2 230 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 PKIBQ9C010 78 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 TRBV23-1A0A0A0MS06 115 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 PRKRAO75569 313 aaKnown RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 ACP1P24666 158 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 TBC1D26Q86UD7 250 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 CDX2Q99626 313 aaPredicted RBP13.69□□□□□ -0.22
COL5A1-201ENST00000371817 M0QZ24 198 aa13.69□□□□□ -0.22
COL5A1-201ENST00000371817 TRGC2P03986 189 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms