RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 DEFB109BQ30KR1 87 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 SLC25A42Q86VD7 318 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 TMEM17Q86X19 198 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 ADAD2Q8NCV1 583 aaKnown RBP17.14■□□□□ 0.33
LHX3-202ENST00000371748 MARCH1Q8TCQ1 289 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 VRK1Q99986 396 aaPredicted RBP17.14■□□□□ 0.33
LHX3-202ENST00000371748 PLEKHJ1Q9NW61 149 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 FRYQ5TBA9 3013 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 CCSO14618 274 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 IL18BPO95998 194 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 CD34P28906 385 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 CBX5P45973 191 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 FUT6P51993 359 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 CLN3Q13286 438 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 PPP1R1AQ13522 171 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 BEX5Q5H9J7 111 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 LPCAT3Q6P1A2 487 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 OR56B2PQ8NGI1 322 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 SEC22AQ96IW7 307 aa17.14■□□□□ 0.33
LHX3-202ENST00000371748 NKX6-2Q9C056 277 aaPredicted RBP17.14■□□□□ 0.33
LHX3-202ENST00000371748 SERPINE3A8MV23 424 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 ARR3P36575 388 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 ATP1B3P54709 279 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 SNU13P55769 128 aaKnown RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 HOGA1Q86XE5 327 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 LINC00518Q8N0U6 118 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 OR5H2Q8NGV7 314 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 PPP1R1CQ8WVI7 109 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 CRIM1Q9NZV1 1036 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 NOP16Q9Y3C1 178 aaKnown RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 NGFP01138 241 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 SERPINA5P05154 406 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 COX5BP10606 129 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 VAX1Q5SQQ9 334 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 FBXW9Q5XUX1 488 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 IGF2-ASQ6U949 168 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 CSNK2A3Q8NEV1 391 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 PHYHIPLQ96FC7 376 aa17.13■□□□□ 0.33
LHX3-202ENST00000371748 HDHD3Q9BSH5 251 aaPredicted RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 REPIN1Q9BWE0 567 aaKnown RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 ZNF471Q9BX82 626 aaPredicted RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 ZNF701Q9NV72 531 aaPredicted RBP17.13■□□□□ 0.33
LHX3-202ENST00000371748 ZFHX2Q9C0A1 2572 aaPredicted RBP17.12■□□□□ 0.33
LHX3-202ENST00000371748 SDCBPO00560 298 aaPredicted RBP17.12■□□□□ 0.33
LHX3-202ENST00000371748 AKR1C4P17516 323 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 ZBTB25P24278 435 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 ACTBL2Q562R1 376 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 PAN3Q58A45 887 aaKnown RBP17.12■□□□□ 0.33
LHX3-202ENST00000371748 LIN54Q6MZP7 749 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 IGFL2Q6UWQ7 119 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 ASCL4Q6XD76 172 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 P4HA3Q7Z4N8 544 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 TMEM185AQ8NFB2 350 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 OR1K1Q8NGR3 316 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 TERB2Q8NHR7 220 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 POM121L2Q96KW2 1035 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 PDCD10Q9BUL8 212 aa17.12■□□□□ 0.33
LHX3-202ENST00000371748 PURGQ9UJV8 347 aaKnown RBP17.12■□□□□ 0.33
LHX3-202ENST00000371748 SFTPBP07988 381 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 NPY4RP50391 375 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 PDZK1IP1Q13113 114 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 PIGYQ3MUY2 71 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 ACOT7LQ6ZUV0 252 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 LYG2Q86SG7 212 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 CALHM1Q8IU99 346 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 BATF2Q8N1L9 274 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 PAPOLGQ9BWT3 736 aaKnown RBP17.11■□□□□ 0.33
LHX3-202ENST00000371748 COMMD9Q9P000 198 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 STARD10Q9Y365 291 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 FIGNL2A6NMB9 653 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 PLP2Q04941 152 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 SNTB1Q13884 538 aaKnown RBP17.11■□□□□ 0.33
LHX3-202ENST00000371748 ATXN7L3Q14CW9 347 aaPredicted RBP17.11■□□□□ 0.33
LHX3-202ENST00000371748 MRPL21Q7Z2W9 205 aaKnown RBP17.11■□□□□ 0.33
LHX3-202ENST00000371748 GCNT2Q8N0V5 402 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 ARRDC1Q8N5I2 433 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 APOBEC3DQ96AK3 386 aaPredicted RBP17.11■□□□□ 0.33
LHX3-202ENST00000371748 NARS2Q96I59 477 aaKnown RBP17.11■□□□□ 0.33
LHX3-202ENST00000371748 FAAP24Q9BTP7 215 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 PRELID3BQ9Y3B1 194 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 ZNF175Q9Y473 711 aa17.11■□□□□ 0.33
LHX3-202ENST00000371748 IGKV1D-8A0A087WSZ0 117 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 C9orf170A2RU37 121 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 GEMIN2O14893 280 aaKnown RBP17.1■□□□□ 0.33
LHX3-202ENST00000371748 IGHG3P01860 377 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 HLA-GP17693 338 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 VAMP1P23763 118 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 OR3A2P47893 321 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 IL13RA1P78552 427 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 ARL6IP1Q15041 203 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 BOLLQ8N9W6 283 aaKnown RBP17.1■□□□□ 0.33
LHX3-202ENST00000371748 OR5T2Q8NGG2 359 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 OR51F2Q8NH61 342 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 EMG1Q92979 244 aaKnown RBP17.1■□□□□ 0.33
LHX3-202ENST00000371748 EFSO43281 561 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 FLI1Q01543 452 aaPredicted RBP17.1■□□□□ 0.33
LHX3-202ENST00000371748 MALLQ13021 153 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 CASTOR1Q8WTX7 329 aa17.1■□□□□ 0.33
LHX3-202ENST00000371748 BCL2L2Q92843 193 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms