RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 OR52N4Q8NGI2 321 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 OR2T6Q8NHC8 308 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 WIPF2Q8TF74 440 aaPredicted RBP10.61□□□□□ -0.71
RPF1-201ENST00000370654 DNAJC9Q8WXX5 260 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 ITFG2Q969R8 447 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 PKIBQ9C010 78 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 RANBP3Q9H6Z4 567 aaPredicted RBP10.61□□□□□ -0.71
RPF1-201ENST00000370654 MOB1AQ9H8S9 216 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 H2AFY2Q9P0M6 372 aaPredicted RBP10.61□□□□□ -0.71
RPF1-201ENST00000370654 TCF19Q9Y242 345 aa10.61□□□□□ -0.71
RPF1-201ENST00000370654 VGLL3A8MV65 326 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 ZNF728P0DKX0 622 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 HOXB6P17509 224 aaKnown RBP10.6□□□□□ -0.71
RPF1-201ENST00000370654 DUSP1P28562 367 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 KIR3DL2P43630 455 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 NPBWR2P48146 333 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 LGALS4P56470 323 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 EDDM3BP56851 147 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 BLCAPP62952 87 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 NSUN5P1Q3KNT7 163 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 ZNF626Q68DY1 528 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 Q8N2B8 174 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 OR5M11Q96RB7 305 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 CDCA4Q9BXL8 241 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 MMP28Q9H239 520 aa10.6□□□□□ -0.71
RPF1-201ENST00000370654 IGKV1-9A0A0C4DH69 117 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 G3V2T6 193 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 PSPNO60542 156 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 IGHV1-8P0DP01 117 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 ZNF85Q03923 595 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 EDDM3AQ14507 147 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 OXLD1Q5BKU9 147 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 Q6ZPA2 131 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 SLC25A26Q70HW3 274 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 OR11H6Q8NGC7 330 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 CEP19Q96LK0 163 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 MNTQ99583 582 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 CIB1Q99828 191 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 CITED2Q99967 270 aaPredicted RBP10.59□□□□□ -0.71
RPF1-201ENST00000370654 CHST6Q9GZX3 395 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 GABARAPL1Q9H0R8 117 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
RPF1-201ENST00000370654 HILPDAQ9Y5L2 63 aa10.59□□□□□ -0.71
RPF1-201ENST00000370654 A0A1W2PPH5 198 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 METTL15A6NJ78 407 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 DHRS7CA6NNS2 312 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 SYT7O43581 403 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 KRT8P05787 483 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 CHRM2P08172 466 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 HTR1FP30939 366 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 SNU13P55769 128 aaKnown RBP10.58□□□□□ -0.72
RPF1-201ENST00000370654 TP53I3Q53FA7 332 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 UTF1Q5T230 341 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 EGFL6Q8IUX8 553 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 OR8H2Q8N162 312 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 OR10H4Q8NGA5 316 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 OR4S1Q8NGB4 309 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 BCAS4Q8TDM0 211 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 ADAT3Q96EY9 351 aaPredicted RBP10.58□□□□□ -0.72
RPF1-201ENST00000370654 CHST5Q9GZS9 411 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 WNT10AQ9GZT5 417 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 RAB18Q9NP72 206 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 DNAH3Q8TD57 4116 aa10.58□□□□□ -0.72
RPF1-201ENST00000370654 LOC107986453A0A1B0GWG9 222 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 hCG_1809904A0A1W2PP81 198 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 A0A1W2PPE2 198 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 A0A1W2PR64 198 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 A0A1W2PRV1 198 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 HAND1O96004 215 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 BCL3P20749 454 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ACTR3P61158 418 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ISL1P61371 349 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ACTA2P62736 377 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ACTG2P63267 376 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ACTC1P68032 377 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ACTA1P68133 377 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 DYNC1I2Q13409 638 aaKnown RBP10.57□□□□□ -0.72
RPF1-201ENST00000370654 CNN3Q15417 329 aaKnown RBP10.57□□□□□ -0.72
RPF1-201ENST00000370654 C11orf88Q6PI97 169 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 LIAT1Q6ZQX7 453 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 GID4Q8IVV7 300 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 OR13D1Q8NGV5 346 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 OR10AC1Q8NH08 325 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 EME1Q96AY2 570 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 MALSU1Q96EH3 234 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 SNX22Q96L94 193 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 PRRG3Q9BZD7 231 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 WARS2Q9UGM6 360 aaKnown RBP10.57□□□□□ -0.72
RPF1-201ENST00000370654 SLC7A11Q9UPY5 501 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 TBL2Q9Y4P3 447 aaKnown RBP10.57□□□□□ -0.72
RPF1-201ENST00000370654 NOTCH3Q9UM47 2321 aa10.57□□□□□ -0.72
RPF1-201ENST00000370654 IGHV2-26A0A0B4J1V2 119 aa10.56□□□□□ -0.72
RPF1-201ENST00000370654 IGKV1-12A0A0C4DH73 117 aa10.56□□□□□ -0.72
RPF1-201ENST00000370654 FBXO24O75426 580 aa10.56□□□□□ -0.72
RPF1-201ENST00000370654 IGKV1D-12P01611 117 aa10.56□□□□□ -0.72
RPF1-201ENST00000370654 OR2T7P0C7T2 308 aa10.56□□□□□ -0.72
RPF1-201ENST00000370654 CD24P25063 80 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms