RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 AMIGO2Q86SJ2 522 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 C8orf59Q8N0T1 100 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 ABHD12Q8N2K0 398 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR52P1PQ8NH57 321 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR51A7Q8NH64 312 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ACOT12Q8WYK0 555 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 RGP1Q92546 391 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 UFD1Q92890 307 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 EXOSC8Q96B26 276 aaKnown RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 PLA2G12AQ9BZM1 189 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 VCXQ9H320 206 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 C19orf73Q9NVV2 129 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 STUB1Q9UNE7 303 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 A0A087WX48 190 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 A0A1W2PRF3 423 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 A0A1W2PRM7 423 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 IGSF23A1L1A6 192 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 FOXI3A8MTJ6 420 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 TMEM150CB9EJG8 249 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 TNFRSF11BO00300 401 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 DCTN6O00399 190 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 DVL1O14640 695 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ZNF354AO60765 605 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 PMS2P2O95744 297 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 CD8AP01732 235 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR1D5P58170 312 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 Q0VFX4 171 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 KIR3DS1Q14943 382 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 SPHARQ15513 63 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 DMKNQ6E0U4 476 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 HAGHLQ6PII5 290 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 IGFL3Q6UXB1 125 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 C9orf139Q6ZV77 190 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 CDC20BQ86Y33 519 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR52R1Q8NGF1 315 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR52I1Q8NGK6 324 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR6N2Q8NGY6 317 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 RNF128Q8TEB7 428 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 SMAP2Q8WU79 429 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 RAB2BQ8WUD1 216 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 IGFBPL1Q8WX77 278 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 APOBEC3DQ96AK3 386 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 PINX1Q96BK5 328 aaKnown RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 UHRF2Q96PU4 802 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 NIPSNAP3BQ9BS92 247 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 TXNIPQ9H3M7 391 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ADGRL4Q9HBW9 690 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 B3GAT1Q9P2W7 334 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 SEC14L4Q9UDX3 406 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 JPT1Q9UK76 154 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ARID1BQ8NFD5 2236 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 IGLV1-36A0A0B4J1U3 117 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 A0A1B0GVT2 93 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 PRKNO60260 465 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 SH3BGRLO75368 114 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 CRLF1O75462 422 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 SULT1C4O75897 302 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ISG15P05161 165 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 BCHEP06276 602 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ADORA3P0DMS8 318 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 HIST1H1EP10412 219 aaKnown RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 IGFBP3P17936 291 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 HGFACQ04756 655 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ACKR1Q16570 336 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 POU2AF1Q16633 256 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 GRINAQ7Z429 371 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 CCDC190Q86UF4 302 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 SEMA6DQ8NFY4 1073 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR10G3Q8NGC4 313 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 OR5L2Q8NGL0 311 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 KLK6Q92876 244 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 ISOC2Q96AB3 205 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 ZC3HAV1LQ96H79 300 aaKnown RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 NODALQ96S42 347 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 REEP1Q9H902 201 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 UBTD1Q9HAC8 227 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 TAS2R5Q9NYW4 299 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 IL36GQ9NZH8 169 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 RCC2Q9P258 522 aaKnown RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 ING1Q9UK53 422 aaPredicted RBP3.31□□□□□ -1.88
MCF2-203ENST00000370576 CACNA1AO00555 2505 aa3.31□□□□□ -1.88
MCF2-203ENST00000370576 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TRAV1-2A0A0B4J238 106 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 A0A0G2JNJ9 132 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 A0A1B0GU03 582 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TRDV1A0A1B0GX56 115 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 TRDCB7Z8K6 153 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 F5H768 121 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 M0R3G1 203 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 RBMXL2O75526 392 aaKnown RBP3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZNF432O94892 652 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 LRATO95237 230 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 GADD45GO95257 159 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 SERPINB10P48595 397 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 CDH12P55289 794 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 CLDN12P56749 244 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 ZNF85Q03923 595 aa3.3□□□□□ -1.88
MCF2-203ENST00000370576 PLPPR5Q32ZL2 321 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms