RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TIMM50Q3ZCQ8 353 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 Q499Y3 187 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 CEP78Q5JTW2 689 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 TIMM23BQ5SRD1 257 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 GLYATL3Q5SZD4 288 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 TMEM244Q5VVB8 128 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 ZNF544Q6NX49 715 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 ZNF704Q6ZNC4 412 aaPredicted RBP3.03□□□□□ -1.92
MCF2-202ENST00000370573 Q6ZSR3 168 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 TBC1D26Q86UD7 250 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 MYO18BQ8IUG5 2567 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 FAM219AQ8IW50 185 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 ZNF101Q8IZC7 436 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 SLC30A7Q8NEW0 376 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 STEAP2Q8NFT2 490 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 OR1J2Q8NGS2 313 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 OR2AE1Q8NHA4 323 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 GPR148Q8TDV2 347 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 ASB5Q8WWX0 329 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 USP9XQ93008 2570 aaPredicted RBP3.03□□□□□ -1.92
MCF2-202ENST00000370573 FGGYQ96C11 551 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 KCTD7Q96MP8 289 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 KCNS3Q9BQ31 491 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 SLC30A2Q9BRI3 323 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 BARHL1Q9BZE3 327 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 ACTR6Q9GZN1 396 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 COMMD4Q9H0A8 199 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 DCSTAMPQ9H295 470 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 MOB1AQ9H8S9 216 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 DCAF16Q9NXF7 216 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 HHLA2Q9UM44 414 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 AMDHD2Q9Y303 409 aa3.03□□□□□ -1.92
MCF2-202ENST00000370573 HEATR1Q9H583 2144 aaKnown RBP3.03□□□□□ -1.92
MCF2-202ENST00000370573 UBR5O95071 2799 aaPredicted RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 TRAV8-7A0A075B6U6 113 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 TRAV1-2A0A0B4J238 106 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 A0A0G2JK05 382 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 A0A1B0GUH1 482 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 SYT7O43581 403 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 NOL3O60936 208 aaKnown RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 SERPINA3P01011 423 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 CECR9P0C854 216 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 OCM2P0CE71 109 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 UBCP0CG48 685 aaKnown RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 ZNF35P13682 527 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 SRMP19623 302 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 ACKR3P25106 362 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 APLNRP35414 380 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 LUMP51884 338 aaPredicted RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 OR10A3P58181 314 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 HTD2P86397 168 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 ZNF92Q03936 586 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 MXD1Q05195 221 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 BEAN1Q3B7T3 259 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 SLC25A35Q3KQZ1 300 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 FBXL19-AS1Q494R0 122 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 AWAT1Q58HT5 328 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 RFPL4BQ6ZWI9 263 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 USP43Q70EL4 1123 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 KCTD9Q7L273 389 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 LRRTM1Q86UE6 522 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 UXS1Q8NBZ7 420 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 ADAT3Q96EY9 351 aaPredicted RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 REEP6Q96HR9 211 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 FAM71F1Q96KD3 344 aaPredicted RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 WFIKKN1Q96NZ8 548 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 AIFM2Q9BRQ8 373 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 MED18Q9BUE0 208 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 OR51B6Q9H340 312 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 PPP1R3EQ9H7J1 279 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 ZNF275Q9NSD4 429 aaPredicted RBP3.03□□□□□ -1.93
MCF2-202ENST00000370573 GSTK1Q9Y2Q3 226 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 V9GYS6 101 aa3.03□□□□□ -1.93
MCF2-202ENST00000370573 UTP20O75691 2785 aaKnown RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 IGHV2OR16-5A0A0B4J2B6 119 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 hCG_38984A0A1B0GV85 526 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 A0A1B0GVI7 797 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 CXorf65A6NEN9 183 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 DPRXA6NFQ7 191 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 ZG16O60844 167 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 SPDEFO95238 335 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 RAF1P04049 648 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 GSTT2P0CG29 244 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 GSTT2BP0CG30 244 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 CD37P11049 281 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 IGFBP3P17936 291 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 ASCL1P50553 236 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 ERVS71-1P61550 626 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 FAM3AP98173 230 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 COL10A1Q03692 680 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TFF3Q07654 80 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 GK2Q14410 553 aaPredicted RBP3.02□□□□□ -1.93
MCF2-202ENST00000370573 TBC1D28Q2M2D7 210 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 C2orf68Q2NKX9 166 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 HSD17B12Q53GQ0 312 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 DMRTC1Q5HYR2 192 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 TMEM255AQ5JRV8 349 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 SPATA46Q5T0L3 261 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 PAMR1Q6UXH9 720 aa3.02□□□□□ -1.93
MCF2-202ENST00000370573 MEX3BQ6ZN04 569 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 283.9 ms