RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 M0R1B8 84 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 PTNP21246 168 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 CD34P28906 385 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 APOBEC3AP31941 199 aaPredicted RBP12.83□□□□□ -0.36
LMO4-201ENST00000370542 FABP6P51161 128 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 MST1LQ2TV78 715 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 C3orf36Q3SXR2 165 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 ZNF684Q5T5D7 378 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 C1orf140Q5VVS0 124 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.36
LMO4-201ENST00000370542 DRAM2Q6UX65 266 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 FAM169BQ8N8A8 192 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 ZDHHC22Q8N966 263 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 MFSD8Q8NHS3 518 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 GPX8Q8TED1 209 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 WDR89Q96FK6 387 aaPredicted RBP12.83□□□□□ -0.36
LMO4-201ENST00000370542 TNFRSF13CQ96RJ3 184 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.36
LMO4-201ENST00000370542 ZNF251Q9BRH9 671 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 PTDSS2Q9BVG9 487 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 FKRPQ9H9S5 495 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 C20orf141Q9NUB4 165 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 TMEM100Q9NV29 134 aa12.83□□□□□ -0.36
LMO4-201ENST00000370542 OR2AT4A6NND4 320 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 RPL36A-HNRNPH2H7BZ11 118 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
LMO4-201ENST00000370542 RAB3DO95716 219 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 WNT11O96014 354 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 S100A6P06703 90 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 SLC25A16P16260 332 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 SPI1P17947 270 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 CENPAP49450 140 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 BLOC1S1P78537 153 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 EGR3Q06889 387 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 RAB35Q15286 201 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 RAB11BQ15907 218 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 RNF212Q495C1 297 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 CDNFQ49AH0 187 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 C9orf135Q5VTT2 229 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 TMEM225Q6GV28 225 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 ULK3Q6PHR2 472 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 ABHD12BQ7Z5M8 362 aaPredicted RBP12.82□□□□□ -0.36
LMO4-201ENST00000370542 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 SERPINA12Q8IW75 414 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 OR51A7Q8NH64 312 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 SFT2D1Q8WV19 159 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
LMO4-201ENST00000370542 PRRT1Q99946 306 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 PDCD1LG2Q9BQ51 273 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 SLC2A8Q9NY64 477 aa12.82□□□□□ -0.36
LMO4-201ENST00000370542 TRAV27A0A087WT01 109 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 LOC100289279A0A1B0GTE1 492 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 LOC102725191A0A1B0GVB3 256 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 F8VVB4 439 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 F8VWA3 439 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 SCGNO76038 276 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 IGLV1-44P01699 117 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 CD79AP11912 226 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 LUMP51884 338 aaPredicted RBP12.81□□□□□ -0.36
LMO4-201ENST00000370542 EFNA4P52798 201 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 NKPD1Q17RQ9 610 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 DCAF12L2Q5VW00 463 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 FDX2Q6P4F2 183 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 LINC00114Q6XXX2 140 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 SYT9Q86SS6 491 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
LMO4-201ENST00000370542 C15orf54Q8N8G6 183 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 CYB561A3Q8NBI2 242 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 SLC30A7Q8NEW0 376 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 OR51S1Q8NGJ8 323 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 OR1K1Q8NGR3 316 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 BCL2L2Q92843 193 aaPredicted RBP12.81□□□□□ -0.36
LMO4-201ENST00000370542 PTX4Q96A99 478 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 NELFAQ9H3P2 528 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 TMEM160Q9NX00 188 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 B3GAT1Q9P2W7 334 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
LMO4-201ENST00000370542 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 A0A1B0GWA3 101 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 MEGF11A6BM72 1044 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 SLC17A2O00624 439 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 PHF1O43189 567 aaPredicted RBP12.8□□□□□ -0.36
LMO4-201ENST00000370542 ZFPL1O95159 310 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 CD74P04233 296 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 CLUP10909 449 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 PNMTP11086 282 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
LMO4-201ENST00000370542 TBPP20226 339 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 S100PP25815 95 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 NAA10P41227 235 aaPredicted RBP12.8□□□□□ -0.36
LMO4-201ENST00000370542 PRKXP51817 358 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 TAS2R31P59538 309 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
LMO4-201ENST00000370542 TMEM249Q2WGJ8 235 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 HIKESHIQ53FT3 197 aa12.8□□□□□ -0.36
LMO4-201ENST00000370542 LY6G6FQ5SQ64 297 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms