RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FAM234AQ9H0X4 552 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 K7N7A8 449 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 INMTO95050 263 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 NPBWR2P48146 333 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 ETV1P50549 477 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 CAPZA1P52907 286 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 MTCP1P56278 107 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 COL10A1Q03692 680 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 TMEM200BQ69YZ2 307 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 XAF1Q6GPH4 301 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 C16orf87Q6PH81 154 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 LHFPL2Q6ZUX7 228 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 LDLRAD3Q86YD5 345 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 FAM185AQ8N0U4 392 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 DHRSXQ8N5I4 330 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 TMEM86BQ8N661 226 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 RPS4Y2Q8TD47 263 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 SPSB1Q96BD6 273 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 OPALINQ96PE5 141 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 PDCD1LG2Q9BQ51 273 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 METTL8Q9H825 291 aaKnown RBP15.51■□□□□ 0.07
CKS1B-203ENST00000368439 SEBOXQ9HB31 216 aaPredicted RBP15.51■□□□□ 0.07
CKS1B-203ENST00000368439 IL36RNQ9UBH0 155 aa15.51■□□□□ 0.07
CKS1B-203ENST00000368439 IGKV1-12A0A0C4DH73 117 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 TMEM212A6NML5 194 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 IGKV1D-12P01611 117 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 DCKP27707 260 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 GBX2P52951 348 aaPredicted RBP15.5■□□□□ 0.07
CKS1B-203ENST00000368439 GUCA2AQ02747 115 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 LAIR2Q6ISS4 152 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 PNKDQ8N490 385 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 PARP16Q8N5Y8 322 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 OR13C9Q8NGT0 318 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 OR5AK2Q8NH90 309 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 HAVCR2Q8TDQ0 301 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 RGP1Q92546 391 aaPredicted RBP15.5■□□□□ 0.07
CKS1B-203ENST00000368439 CHIAQ9BZP6 476 aa15.5■□□□□ 0.07
CKS1B-203ENST00000368439 RBFOX1Q9NWB1 397 aaKnown RBP15.5■□□□□ 0.07
CKS1B-203ENST00000368439 DIMT1Q9UNQ2 313 aaKnown RBP15.5■□□□□ 0.07
CKS1B-203ENST00000368439 TRBV2A0A0J9YWF9 115 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 TMEM82A0PJX8 343 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 NPFFO15130 113 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 SPRY1O43609 319 aaPredicted RBP15.49■□□□□ 0.07
CKS1B-203ENST00000368439 ALX3O95076 343 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 CHRM2P08172 466 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 GNAO1P09471 354 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 CCDC159P0C7I6 412 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 BCL3P20749 454 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 IER3P46695 156 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 POU3F4P49335 361 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 UBE2E1P51965 193 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 RPL31P62899 125 aaKnown RBP15.49■□□□□ 0.07
CKS1B-203ENST00000368439 FOXL1Q12952 345 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 PDZK1IP1Q13113 114 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 IL18R1Q13478 541 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 ZNF273Q14593 569 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 OR2G6Q5TZ20 316 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 ASPHD2Q6ICH7 369 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 MKXQ8IYA7 352 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 Q8IYB0 196 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 SETD9Q8NE22 299 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 OR4M1Q8NGD0 313 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 SPACA5Q96QH8 159 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 ZCCHC4Q9H5U6 513 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 CAB39Q9Y376 341 aaPredicted RBP15.49■□□□□ 0.07
CKS1B-203ENST00000368439 POMT1Q9Y6A1 747 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 SIRT4Q9Y6E7 314 aaPredicted RBP15.49■□□□□ 0.07
CKS1B-203ENST00000368439 HSPE1-MOB4S4R3N1 261 aa15.49■□□□□ 0.07
CKS1B-203ENST00000368439 A0A1W2PRD5 423 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 A0A1W2PRF3 423 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 A0A1W2PRM7 423 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 HAX1O00165 279 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 RPSAP08865 295 aaKnown RBP15.48■□□□□ 0.07
CKS1B-203ENST00000368439 CAPGP40121 348 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 DLX6P56179 175 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 CDK5R1Q15078 307 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 NCR3LG1Q68D85 454 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 ZNF529Q6P280 563 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 C17orf107Q6ZR85 190 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 FBLIM1Q8WUP2 373 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 SSMEM1Q8WWF3 244 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 GGHQ92820 318 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 EMG1Q92979 244 aaKnown RBP15.48■□□□□ 0.07
CKS1B-203ENST00000368439 RFT1Q96AA3 541 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 AJUBAQ96IF1 538 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 COMMD4Q9H0A8 199 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 TNFRSF19Q9NS68 423 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 CLEC2DQ9UHP7 191 aa15.48■□□□□ 0.07
CKS1B-203ENST00000368439 IRGMA1A4Y4 181 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 FAM181BA6NEQ2 426 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 H0YAE9 185 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 ANGPTL7O43827 346 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 KDM4BO94953 1096 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 HAND1O96004 215 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 LALBAP00709 142 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 IGHV4-59P01825 116 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 CCL3L1P16619 93 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 ERVFRD-1P60508 538 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 BLMHQ13867 455 aa15.47■□□□□ 0.07
CKS1B-203ENST00000368439 ZNF146Q15072 292 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms