RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ASCC1Q8N9N2 400 aaKnown RBP12.92□□□□□ -0.34
CKS1B-202ENST00000368436 TRMT10AQ8TBZ6 339 aaKnown RBP12.92□□□□□ -0.34
CKS1B-202ENST00000368436 CEP19Q96LK0 163 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 SEBOXQ9HB31 216 aaPredicted RBP12.92□□□□□ -0.34
CKS1B-202ENST00000368436 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
CKS1B-202ENST00000368436 IGKV1-27A0A075B6S5 117 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 TMEM82A0PJX8 343 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 FBXO24O75426 580 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 DNAJC8O75937 253 aaPredicted RBP12.91□□□□□ -0.34
CKS1B-202ENST00000368436 KRT8P05787 483 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 CD28P10747 220 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 EMX1Q04741 257 aaPredicted RBP12.91□□□□□ -0.34
CKS1B-202ENST00000368436 MEF2CQ06413 473 aaPredicted RBP12.91□□□□□ -0.34
CKS1B-202ENST00000368436 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
CKS1B-202ENST00000368436 SSX2Q16385 188 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 TCF23Q7RTU1 214 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 LYG1Q8N1E2 194 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 YIPF7Q8N8F6 280 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 RPS4Y2Q8TD47 263 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 SNX22Q96L94 193 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 IL4I1Q96RQ9 567 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 CADM1Q9BY67 442 aaKnown RBP12.91□□□□□ -0.34
CKS1B-202ENST00000368436 WNT10AQ9GZT5 417 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 ABCB10Q9NRK6 738 aa12.91□□□□□ -0.34
CKS1B-202ENST00000368436 G3V2T6 193 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 RPP14O95059 124 aaKnown RBP12.9□□□□□ -0.34
CKS1B-202ENST00000368436 OR2T7P0C7T2 308 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 FUT6P51993 359 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 EDDM3BP56851 147 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 REC114Q7Z4M0 266 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 SLAMF9Q96A28 289 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 ZNF714Q96N38 554 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 PRSS22Q9GZN4 317 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 PLEKHA1Q9HB21 404 aa12.9□□□□□ -0.34
CKS1B-202ENST00000368436 WARS2Q9UGM6 360 aaKnown RBP12.9□□□□□ -0.34
CKS1B-202ENST00000368436 A0A1W2PQL4 384 aaPredicted RBP12.89□□□□□ -0.35
CKS1B-202ENST00000368436 MEX3AA1L020 520 aaKnown RBP12.89□□□□□ -0.35
CKS1B-202ENST00000368436 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 SYT7O43581 403 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 GATBO75879 557 aaKnown RBP12.89□□□□□ -0.35
CKS1B-202ENST00000368436 SULT1C4O75897 302 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 ATP6AP1Q15904 470 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 ODF4Q2M2E3 257 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 NSUN5P1Q3KNT7 163 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 MINOS1Q5TGZ0 78 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 Q6ZPA2 131 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 SLC25A26Q70HW3 274 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 TMEM219Q86XT9 240 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 NDUFA11Q86Y39 141 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 EGFL6Q8IUX8 553 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 OR4S1Q8NGB4 309 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 OR52N4Q8NGI2 321 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 C10orf35Q96D05 121 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 TBX5Q99593 518 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 CHST5Q9GZS9 411 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 GABARAPL1Q9H0R8 117 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 MMP28Q9H239 520 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 MINOS1-NBL1R4GNA1 71 aa12.89□□□□□ -0.35
CKS1B-202ENST00000368436 hADV38S2A0JD32 116 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 XPNPEP2O43895 674 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 PRB2P02812 416 aaPredicted RBP12.88□□□□□ -0.35
CKS1B-202ENST00000368436 HTR1FP30939 366 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 OR12D2P58182 307 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ACTA2P62736 377 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 BLCAPP62952 87 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ACTG2P63267 376 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ACTC1P68032 377 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ACTA1P68133 377 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
CKS1B-202ENST00000368436 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 Q6ZS46 218 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ENTHD1Q8IYW4 607 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 PRSS35Q8N3Z0 413 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ADI1Q9BV57 179 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 ENOPH1Q9UHY7 261 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 LINC00312Q9Y6C7 94 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
CKS1B-202ENST00000368436 FAM90A22PA8MWA6 464 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 H3BSH0 61 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 HAND1O96004 215 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 SERPINA3P01011 423 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 IGHA1P01876 353 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-202ENST00000368436 PEX2P28328 305 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 ISL1P61371 349 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 EDDM3AQ14507 147 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 ZDHHC13Q8IUH4 622 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 Q8IYB0 196 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 DNAAF1Q8NEP3 725 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 OR4F17Q8NGA8 305 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 EMG1Q92979 244 aaKnown RBP12.87□□□□□ -0.35
CKS1B-202ENST00000368436 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
CKS1B-202ENST00000368436 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
CKS1B-202ENST00000368436 OR4F4Q96R69 305 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms