RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TAS2R30P59541 319 aa12.27□□□□□ -0.44
COL6A1-201ENST00000361866 TVP23CQ96ET8 276 aa12.27□□□□□ -0.44
COL6A1-201ENST00000361866 GPX7Q96SL4 187 aaPredicted RBP12.27□□□□□ -0.44
COL6A1-201ENST00000361866 GABRG3Q99928 467 aa12.27□□□□□ -0.44
COL6A1-201ENST00000361866 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.44
COL6A1-201ENST00000361866 OPA3Q9H6K4 179 aa12.27□□□□□ -0.44
COL6A1-201ENST00000361866 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 TRAV14DV4A0A0A6YYC5 116 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 C5orf49A4QMS7 147 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 ZNHIT1O43257 154 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 CCR5P51681 352 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 LINC00696Q6ZRV3 163 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 PHF7Q9BWX1 381 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-201ENST00000361866 C12orf49Q9H741 205 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 NAA60Q9H7X0 242 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 KIR2DS1A0A191URI9 304 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 LILRA5A6NI73 299 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 VAMP5O95183 116 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 GRPP07492 148 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 THBS4P35443 961 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 PSMB3P49720 205 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 DUSP3P51452 185 aaPredicted RBP12.27□□□□□ -0.45
COL6A1-201ENST00000361866 KIR2DS1Q14954 304 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 OR4F5Q8NH21 305 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 OR4F4Q96R69 305 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 ARV1Q9H2C2 271 aa12.27□□□□□ -0.45
COL6A1-201ENST00000361866 NXPH2O95156 264 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 BMP5P22003 454 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-201ENST00000361866 EXTL1Q92935 676 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 SPACA9Q96E40 222 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-201ENST00000361866 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 SYT13Q7L8C5 426 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 AGBL5Q8NDL9 886 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 GPHA2Q96T91 129 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 PIGBOS1A0A0B4J2F0 54 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 CCL2P13500 99 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 HYAL1Q12794 435 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 MSMO1Q15800 293 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 LYSMD4Q5XG99 296 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 PLPPR2Q96GM1 343 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 PLEKHF2Q9H8W4 249 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 RNF222A6NCQ9 220 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 TGFBR3LH3BV60 316 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 GEMIN2O14893 280 aaKnown RBP12.26□□□□□ -0.45
COL6A1-201ENST00000361866 PDGFBP01127 241 aaPredicted RBP12.26□□□□□ -0.45
COL6A1-201ENST00000361866 HTD2P86397 168 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 ZXDAP98168 799 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 SLC22A18ASQ8N1D0 253 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 LINC00469Q8N7U9 141 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 LANCL2Q9NS86 450 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 CBY1Q9Y3M2 126 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 SIT1Q9Y3P8 196 aa12.26□□□□□ -0.45
COL6A1-201ENST00000361866 DOCK7Q96N67 2140 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 IGHV1OR21-1A0A087WYE8 117 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 FAM166BA8MTA8 275 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 SIRPB1O00241 398 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 EIF3GO75821 320 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL6A1-201ENST00000361866 MBP02144 154 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 FUT3P21217 361 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 DMBX1Q8NFW5 382 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 OR13G1Q8NGZ3 307 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 C5orf66Q9H5L9 145 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 PISDQ9UG56 409 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 GPR132Q9UNW8 380 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 HDGFL3Q9Y3E1 203 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 TIMM10BQ9Y5J6 103 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 MFNGO00587 321 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 P2RY4P51582 365 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 FZD5Q13467 585 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 DHRS11Q6UWP2 260 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 DEFB123Q8N688 67 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 SOX7Q9BT81 388 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 WDR87Q6ZQQ6 2873 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF814B7Z6K7 855 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 DEGS1O15121 323 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 METTL15P1P0C7V9 234 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 GLB1P16278 677 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 ZNF32P17041 273 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 GPM6AP51674 278 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 SRSF3P84103 164 aaKnown RBP12.25□□□□□ -0.45
COL6A1-201ENST00000361866 GDF15Q99988 308 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 SLC26A1Q9H2B4 701 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 MYOTQ9UBF9 498 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 OSGIN2Q9Y236 505 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 NBASA2RRP1 2371 aa12.25□□□□□ -0.45
COL6A1-201ENST00000361866 ROM1Q03395 351 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 CNEP1R1Q8N9A8 125 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 OR11L1Q8NGX0 322 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 IP6K3Q96PC2 410 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 MFRPQ9BY79 579 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 GNG12Q9UBI6 72 aa12.24□□□□□ -0.45
COL6A1-201ENST00000361866 PHF3Q92576 2039 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms