RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 YKT6O15498 198 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 BCL2L11O43521 198 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 SPRY1O43609 319 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-202ENST00000360642 TDGF1P13385 188 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 AKR1C4P17516 323 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 CSNK1A1P48729 337 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 MFAP4P55083 255 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 TAS2R31P59538 309 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 KISS1Q15726 138 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 SGCAQ16586 387 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 ACTBL2Q562R1 376 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 TMEM128Q5BJH2 165 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 SLC16A14Q7RTX9 510 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 C1QL2Q7Z5L3 287 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 PEG10Q86TG7 708 aaKnown RBP6.34□□□□□ -1.39
CLCN3-202ENST00000360642 ZIC4Q8N9L1 334 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 MARCH1Q8TCQ1 289 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 PPA2Q9H2U2 334 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 C5orf66Q9H5L9 145 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 COMMD9Q9P000 198 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 FLVCR1Q9Y5Y0 555 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 SESN1Q9Y6P5 492 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 CRTAPO75718 401 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 DHRS3O75911 302 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 KLK3P07288 261 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 NUP62P37198 522 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 PTGFRP43088 359 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 SSR4P51571 173 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 TRA2AQ13595 282 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 UBE2V2Q15819 145 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 WDR5BQ86VZ2 330 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 LHFPL1Q86WI0 220 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 OR9K2Q8NGE7 335 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 TMEM230Q96A57 120 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 PHYHIPLQ96FC7 376 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 PGAM5Q96HS1 289 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 NMES1Q9C002 83 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF160Q9HCG1 818 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 TRBV6-7A0A0A0MS04 114 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 IGHV3-15A0A0B4J1V0 119 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 KANTRA0A1W2PQU2 76 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 OR5H15A6NDH6 313 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 NKX2-8O15522 239 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 MBPP02686 304 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 CCL4P13236 92 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 CBX5P45973 191 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 MLF1P58340 268 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 LRRC37A5PQ49AS3 106 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 AADACL3Q5VUY0 350 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 RELL2Q8NC24 303 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 PXT1Q8NFP0 134 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 C10orf35Q96D05 121 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 RTBDNQ9BSG5 229 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 URM1Q9BTM9 101 aaKnown RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 TM2D1Q9BX74 207 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 CHST5Q9GZS9 411 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 DNTTIP1Q9H147 329 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 PCDHGA1Q9Y5H4 931 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 NCOA6Q14686 2063 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 F5H5K5 113 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 LGALS8O00214 317 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 BET1O15155 118 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 WDPCPO95876 746 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 CRHP06850 196 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 GUCA1AP43080 201 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 TIRAPP58753 221 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 CSNK2A1P68400 391 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 RAET1LQ5VY80 246 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 C20orf196Q8IYI0 205 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 UBALD2Q8IYN6 164 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 STPG2Q8N412 459 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 OR2Y1Q8NGV0 311 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 CASTOR1Q8WTX7 329 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 PP6455Q8WZ26 134 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 MR1Q95460 341 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 GPER1Q99527 375 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 NAA11Q9BSU3 229 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-202ENST00000360642 GPR87Q9BY21 358 aa6.33□□□□□ -1.4
CLCN3-202ENST00000360642 A0A0B4J2A0 478 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 A0A0J9YW62 118 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 NPIPA2E9PIF3 369 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 NPIPA3F8WFD2 350 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 CBR3O75828 277 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 PSMB6P28072 239 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 DLSTP36957 453 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 LUMP51884 338 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 B3GALT5-AS1P59052 145 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 SUPT4H1P63272 117 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 FAM27BQ5VT28 67 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 NSUN5P2Q63ZY6 315 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 KCTD9Q7L273 389 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 RPS19BP1Q86WX3 136 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 LRRC18Q8N456 261 aa6.32□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 PNLDC1Q8NA58 520 aaKnown RBP6.32□□□□□ -1.4
CLCN3-202ENST00000360642 BEND2Q8NDZ0 799 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms