RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 UCNP55089 124 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 OR4C5Q8NGB2 326 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 OR13C5Q8NGS8 318 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 SLC25A40Q8TBP6 338 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 MANBALQ9NQG1 85 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 APOBEC4Q8WW27 367 aaKnown RBP8.65□□□□□ -1.02
CUX1-203ENST00000360264 RASL11BQ9BPW5 248 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 KIR2DL1P43626 348 aaPredicted RBP8.65□□□□□ -1.02
CUX1-203ENST00000360264 KIR2DL2P43627 348 aaPredicted RBP8.65□□□□□ -1.02
CUX1-203ENST00000360264 EVX1P49640 407 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 GFERP55789 205 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 ZNF441Q8N8Z8 693 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 NUDCD2Q8WVJ2 157 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 FBXO17Q96EF6 278 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 FAM90A27PA6NNH2 459 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 CXCL13O43927 109 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 GLI4P10075 376 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 SRD5A2P31213 254 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 ACY3Q96HD9 319 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 UQCC1Q9NVA1 299 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 OPN1MWP04001 364 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 OPN1MW2P0DN77 364 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 OPN1MW3P0DN78 364 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 HTRA3P83110 453 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 RIGQ13278 110 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 CCL17Q92583 94 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 KRTDAPP60985 99 aa8.65□□□□□ -1.02
CUX1-203ENST00000360264 ZNF707Q96C28 371 aaPredicted RBP8.65□□□□□ -1.02
CUX1-203ENST00000360264 FGF20Q9NP95 211 aaPredicted RBP8.65□□□□□ -1.02
CUX1-203ENST00000360264 TECRQ9NZ01 308 aaKnown RBP8.65□□□□□ -1.02
CUX1-203ENST00000360264 CA11O75493 328 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 ALX3O95076 343 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 BCL3P20749 454 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 ZP3P21754 424 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 YBX1P67809 324 aaKnown RBP8.65□□□□□ -1.03
CUX1-203ENST00000360264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 SLC7A10Q9NS82 523 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 RASL12Q9NYN1 266 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 TRDCB7Z8K6 153 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 MYPOPQ86VE0 399 aaPredicted RBP8.65□□□□□ -1.03
CUX1-203ENST00000360264 SPICQ8N5J4 248 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 NUBPLQ8TB37 319 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 MRPL22Q9NWU5 206 aaKnown RBP8.65□□□□□ -1.03
CUX1-203ENST00000360264 USF1P22415 310 aaPredicted RBP8.65□□□□□ -1.03
CUX1-203ENST00000360264 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.03
CUX1-203ENST00000360264 CST9Q5W186 159 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 CLRN3Q8NCR9 226 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 EXTL1Q92935 676 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 NAA50Q9GZZ1 169 aaKnown RBP8.65□□□□□ -1.03
CUX1-203ENST00000360264 TBX21Q9UL17 535 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 OR6X1Q8NH79 312 aa8.65□□□□□ -1.03
CUX1-203ENST00000360264 MAP1LC3B2A6NCE7 125 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 C21orf140B9A014 251 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 GNG10P50151 68 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 MCHR2Q969V1 340 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 MAP1LC3BQ9GZQ8 125 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 MMP25Q9NPA2 562 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ADAM20O43506 726 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 DHRS11Q6UWP2 260 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 C20orf27Q9GZN8 174 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 MMP26Q9NRE1 261 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ANXA10Q9UJ72 324 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PSG11Q9UQ72 335 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 IGSF23A1L1A6 192 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 LSM11P83369 360 aaKnown RBP eCLIP8.64□□□□□ -1.035e-6■■■□□ 16.8
CUX1-203ENST00000360264 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 CCL4L1Q8NHW4 92 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 BLNKQ8WV28 456 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PERPQ96FX8 193 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 SARGQ9BW04 601 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 IGHV3-15A0A0B4J1V0 119 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 A6NDN8 102 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 LILRA3Q8N6C8 439 aaPredicted RBP8.64□□□□□ -1.03
CUX1-203ENST00000360264 OR1B1Q8NGR6 318 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 SLC25A37Q9NYZ2 338 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 TBX19O60806 448 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 CLEC2LP0C7M8 214 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 FBXL17Q9UF56 701 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ERRFI1Q9UJM3 462 aaPredicted RBP8.64□□□□□ -1.03
CUX1-203ENST00000360264 MASP2O00187 686 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 HIST1H3AP68431 136 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 NHLH1Q02575 133 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 NHLH2Q02577 135 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 FADS6Q8N9I5 356 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 WFDC5Q8TCV5 224 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ARAP2Q8WZ64 1704 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PI3P19957 117 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 CDAP32320 146 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 C21orf58P58505 322 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ASTLQ6HA08 431 aaPredicted RBP8.64□□□□□ -1.03
CUX1-203ENST00000360264 CD300LDQ6UXZ3 194 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 GLDNQ6ZMI3 551 aaPredicted RBP8.64□□□□□ -1.03
CUX1-203ENST00000360264 ZNF66Q6ZN08 573 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ASB5Q8WWX0 329 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PIK3IP1Q96FE7 263 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 CES1P1Q9UKY3 287 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 FZR1Q9UM11 496 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PIEZO1Q92508 2521 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 KCNE1BA0A087WTH5 132 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms