RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ZNF716A6NP11 495 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 PATE3B3GLJ2 98 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 YKT6O15498 198 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 JTBO76095 146 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 IGKV1D-12P01611 117 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 OTX2P32243 289 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 ID4P47928 161 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 SULT1A2P50226 295 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 RPS18P62269 152 aaKnown RBP7.46□□□□□ -1.22
RFX3-202ENST00000358730 CEACAM16Q2WEN9 425 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 PLCXD3Q63HM9 321 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 OR5L1Q8NGL2 311 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 MAFAQ8NHW3 353 aaPredicted RBP7.46□□□□□ -1.22
RFX3-202ENST00000358730 CPT1CQ8TCG5 803 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 KCNE4Q8WWG9 221 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 SGCZQ96LD1 299 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 FOXB1Q99853 325 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 SHANK1Q9Y566 2161 aa7.46□□□□□ -1.22
RFX3-202ENST00000358730 NTN3O00634 580 aaPredicted RBP7.45□□□□□ -1.22
RFX3-202ENST00000358730 TRAPPC6AO75865 159 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 GAPDHP04406 335 aaKnown RBP7.45□□□□□ -1.22
RFX3-202ENST00000358730 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 SFTA3P0C7M3 94 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 RFPL3SP0C7P2 107 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 GLI4P10075 376 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 PSG4Q00888 419 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 ZNF92Q03936 586 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 TRA2AQ13595 282 aaKnown RBP eCLIP7.45□□□□□ -1.22
RFX3-202ENST00000358730 DHRS7BQ6IAN0 325 aaPredicted RBP7.45□□□□□ -1.22
RFX3-202ENST00000358730 Q6ZRG5 221 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 OSR2Q8N2R0 312 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 ESX1Q8N693 406 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 SLC2A9Q9NRM0 540 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 ST3GAL6Q9Y274 331 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 AMDHD2Q9Y303 409 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 hCG_38984A0A1B0GV85 526 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 DIRAS3O95661 229 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
RFX3-202ENST00000358730 F2RL1P55085 397 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 ZFP36L1Q07352 338 aaKnown RBP7.45□□□□□ -1.22
RFX3-202ENST00000358730 TMEM187Q14656 261 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 PDCD1Q15116 288 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 SWI5Q1ZZU3 235 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 WIPI1Q5MNZ9 446 aaPredicted RBP7.45□□□□□ -1.22
RFX3-202ENST00000358730 TMEM42Q69YG0 159 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 CLEC9AQ6UXN8 241 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 RAB11FIP2Q7L804 512 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 BATF2Q8N1L9 274 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 OR10D3Q8NH80 312 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 FGFBP3Q8TAT2 258 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 ERGIC1Q969X5 290 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 OR2H1Q9GZK4 316 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 WNT5BQ9H1J7 359 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 BCO1Q9HAY6 547 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 ZNF286AQ9HBT8 521 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 SLC7A11Q9UPY5 501 aa7.45□□□□□ -1.22
RFX3-202ENST00000358730 TERTO14746 1132 aaKnown RBP7.44□□□□□ -1.22
RFX3-202ENST00000358730 XRCC2O43543 280 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 NDUFA2O43678 99 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 CD80P33681 288 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 FAM3AP98173 230 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ABLIM2Q6H8Q1 611 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 DHRS11Q6UWP2 260 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 LYZL2Q7Z4W2 148 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 OR10Z1Q8NGY1 313 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 OR2V1Q8NHB1 315 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PIGCQ92535 297 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PARP12Q9H0J9 701 aaKnown RBP7.44□□□□□ -1.22
RFX3-202ENST00000358730 PARP11Q9NR21 331 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ZNF391Q9UJN7 358 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 LHX6Q9UPM6 363 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 TIMM10BQ9Y5J6 103 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
RFX3-202ENST00000358730 LRRC3CA6NJW4 275 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 E5RGE8 158 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PDCD6O75340 191 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 OR8U9P0C7N5 309 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 TCN2P20062 427 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 NFYBP25208 207 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 GLP1RP43220 463 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 FUT6P51993 359 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 MALLQ13021 153 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PDZK1IP1Q13113 114 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 KRTAP27-1Q3LI81 207 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 BTNL8Q6UX41 500 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ASCL4Q6XD76 172 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 OR8U1Q8NH10 309 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ABHD3Q8WU67 409 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 GALNT14Q96FL9 552 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 RGCCQ9H4X1 137 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ZNF442Q9H7R0 627 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PLEKHA2Q9HB19 425 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ZFP57Q9NU63 452 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PLA2G2EQ9NZK7 142 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 NSG2Q9Y328 171 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 CCDC163A0A0D9SF12 145 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ZNF816-ZNF321PA0A0X1KG74 233 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 F10P00742 488 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 IGHV3-9P01782 118 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms