RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TRIM61Q5EBN2 209 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 RD3Q7Z3Z2 195 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 OR51T1Q8NGJ9 327 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 C10orf35Q96D05 121 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CHRNA10Q9GZZ6 450 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 C11orf1Q9H5F2 150 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 A0A087X0M5 115 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 A0A1B0GX30 115 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-205ENST00000357568 IGLV3-1P01715 115 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 HCKP08631 526 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CEACAM1P13688 526 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 NDUFB7P17568 137 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CTSSP25774 331 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 SFTPDP35247 375 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 PPP1CCP36873 323 aaKnown RBP9.32□□□□□ -0.92
CAPN3-205ENST00000357568 GABRA4P48169 554 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 UCP3P55916 312 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 SRPXP78539 464 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 HSF1Q00613 529 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 LPAL2Q16609 132 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 THEM4Q5T1C6 240 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 LGI3Q8N145 548 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ADPRHL1Q8NDY3 354 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 OR51E1Q8TCB6 317 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF721Q8TF20 911 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CA5BP1Q8WTZ4 195 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 PIGQQ9BRB3 760 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF2Q9BSG1 426 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-205ENST00000357568 RTN4RQ9BZR6 473 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 BANF2Q9H503 90 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 CHST11Q9NPF2 352 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 ZDBF2Q9HCK1 2354 aa9.32□□□□□ -0.92
CAPN3-205ENST00000357568 GOLGA4Q13439 2230 aaKnown RBP9.31□□□□□ -0.92
CAPN3-205ENST00000357568 IGKV3D-11A0A0A0MRZ8 115 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 TRAV1-1A0A0B4J248 108 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 FAM230AA0A1W2PPH8 454 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 COX5BP10606 129 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 NHLH1Q02575 133 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 HNF4GQ14541 408 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 FAM213BQ8TBF2 198 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 GNPNAT1Q96EK6 184 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-205ENST00000357568 NIPSNAP3BQ9BS92 247 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 ANGPTL4Q9BY76 406 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 LANCL2Q9NS86 450 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 PITPNC1Q9UKF7 332 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 HSF4Q9ULV5 492 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 PTRH2Q9Y3E5 179 aaKnown RBP9.31□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF732B4DXR9 585 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 TMEM150CB9EJG8 249 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 HSPA12AO43301 675 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 RAMP1O60894 148 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 CDS2O95674 445 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 NUDT14O95848 222 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 DDAH2O95865 285 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 CFIP05156 583 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 CXCL1P09341 107 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 MMP9P14780 707 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 FGF7P21781 194 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 HNRNPKP61978 463 aaKnown RBP eCLIP9.31□□□□□ -0.92
CAPN3-205ENST00000357568 GRB2P62993 217 aaKnown RBP9.31□□□□□ -0.92
CAPN3-205ENST00000357568 FMODQ06828 376 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 DEFB110Q30KQ9 67 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 TCEAL6Q6IPX3 200 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 SPNS3Q6ZMD2 512 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF429Q86V71 674 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 C1orf87Q8N0U7 546 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 SLC37A2Q8TED4 501 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 BOD1Q96IK1 185 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 SSX3Q99909 188 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 SMOC1Q9H4F8 434 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 GPR84Q9NQS5 396 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 ANXA10Q9UJ72 324 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 SPTBP11277 2137 aa9.31□□□□□ -0.92
CAPN3-205ENST00000357568 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF726A6NNF4 738 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SCAF4O95104 1147 aaKnown RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 CTSBP07858 339 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SOD3P08294 240 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ZNF17P17021 662 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 BLVRBP30043 206 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 LSM6P62312 80 aaKnown RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 DLK1P80370 383 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 GAMTQ14353 236 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SSPNQ14714 243 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 GNMTQ14749 295 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 PLXDC2Q6UX71 529 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 SLC38A9Q8NBW4 561 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 OR8B12Q8NGG6 310 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 OR4D5Q8NGN0 318 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 OR14K1Q8NGZ2 314 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 OR14L1PQ8NHC6 308 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 BSCL2Q96G97 398 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 NEU1Q99519 415 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 GPER1Q99527 375 aa9.3□□□□□ -0.92
CAPN3-205ENST00000357568 MRPL13Q9BYD1 178 aaKnown RBP9.3□□□□□ -0.92
CAPN3-205ENST00000357568 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms