RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DUSP1P28562 367 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 PIGYQ3MUY2 71 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 FAM90A1Q86YD7 464 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 KRTAP1-3Q8IUG1 177 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 FAM58AQ8N1B3 248 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 LGALS14Q8TCE9 139 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 CYYR1Q96J86 154 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 HMG20AQ9NP66 347 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 WIPI2Q9Y4P8 454 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 NPTNQ9Y639 398 aa21.27■■□□□ 1
SSBP3-202ENST00000357475 AKAP9Q99996 3911 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 PPIAL4EA0A075B759 164 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 TMEM14DPA8MWL7 114 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 PPIAL4DF5H284 164 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 IFNL4K9M1U5 179 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 LDLRAD4O15165 306 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 PPIAL4FP0DN26 164 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 CEBPDP49716 269 aaPredicted RBP21.26■□□□□ 0.99
SSBP3-202ENST00000357475 EFNB2P52799 333 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 BTG1P62324 171 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 PDCD1Q15116 288 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 DNM1P46Q6ZS02 220 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 BIVMQ86UB2 503 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 C1orf87Q8N0U7 546 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 LRRC75A-AS1Q8N1F1 130 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 Q8NFD4 153 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 PPIAL4AQ9Y536 164 aa21.26■□□□□ 0.99
SSBP3-202ENST00000357475 OOEPA6NGQ2 149 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 CRTAPO75718 401 aaPredicted RBP21.25■□□□□ 0.99
SSBP3-202ENST00000357475 IGHV2-70P01814 119 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 PDLIM4P50479 330 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 FGF12P61328 243 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 ELP2Q6IA86 826 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 C10orf105Q8TEF2 133 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 GAL3ST1Q99999 423 aa21.25■□□□□ 0.99
SSBP3-202ENST00000357475 IGHV4-30-2A0A087WSY4 118 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 LGALS8O00214 317 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 MPIG6BO95866 241 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 GYPAP02724 150 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 UBBP0CG47 229 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 MGMTP16455 207 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 TEX36Q5VZQ5 186 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 BPESC1Q9GZL8 116 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 TMEM165Q9HC07 324 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 MYOZ1Q9NP98 299 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-202ENST00000357475 CCDC59Q9P031 241 aaKnown RBP21.24■□□□□ 0.99
SSBP3-202ENST00000357475 NLKQ9UBE8 527 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DNAJB11Q9UBS4 358 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 GHRLQ9UBU3 117 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 A0A1B0GW55 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 CSTBP04080 98 aaKnown RBP21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L2P0CJ85 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L3P0CJ86 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L4P0CJ87 422 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L5P0CJ88 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L6P0CJ89 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L7P0CJ90 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 PSG2P11465 335 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 AMY2BP19961 511 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 GIFP27352 417 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 GPR6P46095 362 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-202ENST00000357475 TMEM33P57088 247 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4L9Q6RFH8 374 aaPredicted RBP21.24■□□□□ 0.99
SSBP3-202ENST00000357475 CROCCP3Q8IVE0 287 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 Q8IYB0 196 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 OSR2Q8N2R0 312 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 FAM168AQ92567 244 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 SELENOIQ9C0D9 397 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 SLIRPQ9GZT3 109 aaKnown RBP21.24■□□□□ 0.99
SSBP3-202ENST00000357475 RASL12Q9NYN1 266 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 DUX4Q9UBX2 424 aa21.24■□□□□ 0.99
SSBP3-202ENST00000357475 SETXQ7Z333 2677 aaKnown RBP21.23■□□□□ 0.99
SSBP3-202ENST00000357475 IGKV1D-17A0A075B6S4 117 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 CLEC12BQ2HXU8 276 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 SMIM21Q3B7S5 101 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 Q5PR19 223 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 CLEC2AQ6UVW9 174 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 CD177Q8N6Q3 437 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 TMEM246Q9BRR3 403 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 NICN1Q9BSH3 213 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 NARFLQ9H6Q4 476 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 OR14J1Q9UGF5 321 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 METRNQ9UJH8 293 aa21.23■□□□□ 0.99
SSBP3-202ENST00000357475 A0A0A6YYD4 124 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 ISPDA4D126 451 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 RFPL4AA6NLU0 287 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 OR2AT4A6NND4 320 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 RFPL4AL1F8VTS6 287 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 ZNF780AO75290 641 aaPredicted RBP21.22■□□□□ 0.99
SSBP3-202ENST00000357475 GTF2F2P13984 249 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 RBM11P57052 281 aaKnown RBP21.22■□□□□ 0.99
SSBP3-202ENST00000357475 MICBQ29980 383 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 STUMQ69YW2 141 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 LYPD2Q6UXB3 125 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 RTN4RL2Q86UN3 420 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 OR51T1Q8NGJ9 327 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 CST11Q9H112 138 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 ST3GAL6Q9Y274 331 aa21.22■□□□□ 0.99
SSBP3-202ENST00000357475 PRRC2AP48634 2157 aaKnown RBP21.22■□□□□ 0.99
SSBP3-202ENST00000357475 CCDC168Q8NDH2 2452 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms