RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 NUPL2O15504 423 aaKnown RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 SPRY1O43609 319 aaPredicted RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 EPHA2P29317 976 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 POLR2IP36954 125 aaKnown RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 OR2B8PP59922 312 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 OR8U1Q8NH10 309 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 IGHV1-45A0A0A0MS14 117 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 LIMS3P0CW19 117 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 LIMS4P0CW20 117 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 CALCRP30988 508 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 ZNF439Q8NDP4 499 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 OR1L1Q8NH94 360 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 C20orf24Q9BUV8 137 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 SERTM2A0A1B0GWG4 89 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 SNRNP70P08621 437 aaKnown RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 FBXL2Q9UKC9 423 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 SF3B6Q9Y3B4 125 aaKnown RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 SPCS2Q15005 226 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 VN1R4Q7Z5H5 301 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 YIPF5Q969M3 257 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 COA4Q9NYJ1 87 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 LIPGQ9Y5X9 500 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 HYAL3O43820 417 aaPredicted RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 OR2F2O95006 317 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 OR2F1Q13607 317 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 NFAM1Q8NET5 270 aaPredicted RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 OR13F1Q8NGS4 319 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 ZNF501Q96CX3 271 aaPredicted RBP9.99□□□□□ -0.81
FN1-204ENST00000356005 ICAM5Q9UMF0 924 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 CCL3P10147 92 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 S100A11P31949 105 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 BAGE3Q86Y29 109 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 BAGE2Q86Y30 109 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 GATA6Q92908 595 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 GON7Q9BXV9 100 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 SIP14410 1827 aa9.99□□□□□ -0.81
FN1-204ENST00000356005 C7orf72A4D263 438 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 PDLIM4P50479 330 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 C19orf48Q6RUI8 117 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 NHLRC2Q8NBF2 726 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 NUDT8Q8WV74 236 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 UBE2MP61081 183 aaKnown RBP9.98□□□□□ -0.81
FN1-204ENST00000356005 TMEM229BQ8NBD8 167 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 MED9Q9NWA0 146 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ZNF835Q9Y2P0 537 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 CSAG2Q9Y5P2 127 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.98□□□□□ -0.816e-15■■■■■ 33
FN1-204ENST00000356005 SPINT1O43278 529 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 LSMEM1Q8N8F7 131 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 AK3Q9UIJ7 227 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 OR52I2Q8NH67 350 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 EID2BQ96D98 161 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 GHITMQ9H3K2 345 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 TMED3Q9Y3Q3 217 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 RNF115Q9Y4L5 304 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 SMAGPQ0VAQ4 97 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ELOVL5Q9NYP7 299 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 FAM106CPP0CH98 169 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ATP5J2P56134 94 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 C19orf57Q0VDD7 668 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 SLC25A35Q3KQZ1 300 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 DGAT2L6Q6ZPD8 337 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 FAM214BQ7L5A3 538 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 OR2M3Q8NG83 312 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ADGRG7Q96K78 797 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 SMLR1H3BR10 107 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 PDCD6O75340 191 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ARG1P05089 322 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ENDOGQ14249 297 aaKnown RBP9.98□□□□□ -0.81
FN1-204ENST00000356005 ZNF788Q6ZQV5 615 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 HIST2H3AQ71DI3 136 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 ABHD3Q8WU67 409 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
FN1-204ENST00000356005 CHD3Q12873 2000 aaKnown RBP9.97□□□□□ -0.81
FN1-204ENST00000356005 PSMB6P28072 239 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 COL19A1Q14993 1142 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 TSTD3H0UI37 97 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 CRHP06850 196 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
FN1-204ENST00000356005 GGTLC2Q14390 218 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 ADIRFQ15847 76 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 FAM221AA4D161 298 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 RTN4IP1Q8WWV3 396 aaPredicted RBP9.97□□□□□ -0.81
FN1-204ENST00000356005 SLC7A6Q92536 515 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 TRBV23-1A0A0A0MS06 115 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 TAGLNQ01995 201 aaKnown RBP9.97□□□□□ -0.81
FN1-204ENST00000356005 TMEM128Q5BJH2 165 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 ACOT7LQ6ZUV0 252 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 OR10V1Q8NGI7 309 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 SLC35D1Q9NTN3 355 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 KRASP01116 189 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 GIPP09681 153 aaPredicted RBP9.97□□□□□ -0.81
FN1-204ENST00000356005 NME2P22392 152 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 PRSS45Q7RTY3 260 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 OR5A2Q8NGI9 324 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 NRG4Q8WWG1 115 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 RSRP1Q9BUV0 290 aa9.97□□□□□ -0.81
FN1-204ENST00000356005 SLC25A10Q9UBX3 287 aaPredicted RBP9.97□□□□□ -0.81
FN1-204ENST00000356005 DBX1A6NMT0 343 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms