RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ALX3O95076 343 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF425Q6IV72 752 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 FA2HQ7L5A8 372 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 OR8B3Q8NGG8 313 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 OR8B2Q96RD0 313 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 NUP205Q92621 2012 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 WDR31Q8NA23 367 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 BLNKQ8WV28 456 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 PLSCR3Q9NRY6 295 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
COL18A1-202ENST00000355480 AKAP11Q9UKA4 1901 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 B3GALNT1O75752 331 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 SPINK2P20155 84 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 CNTD2Q9H8S5 307 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 CACNG5Q9UF02 275 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 NAGKQ9UJ70 344 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 CYR61O00622 381 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 ACTL6AO96019 429 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 TAGLNQ01995 201 aaKnown RBP15.98■□□□□ 0.15
COL18A1-202ENST00000355480 Q1RN00 199 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF680Q8NEM1 530 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 COL22A1Q8NFW1 1626 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-202ENST00000355480 NDUFB6O95139 128 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 FGF9P31371 208 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-202ENST00000355480 AMTP48728 403 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 FOXO1Q12778 655 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 TNXAQ16473 311 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 SPNS3Q6ZMD2 512 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 TIPARPQ7Z3E1 657 aaKnown RBP15.98■□□□□ 0.15
COL18A1-202ENST00000355480 UCK1Q9HA47 277 aa15.98■□□□□ 0.15
COL18A1-202ENST00000355480 ASCC3Q8N3C0 2202 aaKnown RBP15.97■□□□□ 0.15
COL18A1-202ENST00000355480 PATE3B3GLJ2 98 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 LANCL1O43813 399 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 CTAG2O75638 210 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 RNF165Q6ZSG1 346 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 D2HGDHQ8N465 521 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 C10orf90Q96M02 699 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 RHOFQ9HBH0 211 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 OR1A1Q9P1Q5 309 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 K7ESF4 209 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 SFT2D2O95562 160 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF788Q6ZQV5 615 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 NRTNQ99748 197 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 LY86O95711 162 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 IGHA1P01876 353 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 IGHA2P01877 340 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 ETFDHQ16134 617 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 ETV3LQ6ZN32 361 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF385DQ9H6B1 395 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 SIRT3Q9NTG7 399 aaPredicted RBP15.97■□□□□ 0.15
COL18A1-202ENST00000355480 SHROOM3Q8TF72 1996 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 WNT1P04628 370 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 SUMO1P63165 101 aaKnown RBP15.97■□□□□ 0.15
COL18A1-202ENST00000355480 DOK5Q9P104 306 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 OR5V1Q9UGF6 321 aa15.97■□□□□ 0.15
COL18A1-202ENST00000355480 KRTDAPP60985 99 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 CTF1Q16619 201 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 CCDC190Q86UF4 302 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 SFTPA2Q8IWL1 248 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 OR8B12Q8NGG6 310 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 ZMIZ1Q9ULJ6 1067 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 SLC45A2Q9UMX9 530 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 IGHV5-10-1A0A0J9YXX1 117 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 F2RL2O00254 374 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 AGFG2O95081 481 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 PRSS42Q7Z5A4 293 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 GPR137Q96N19 417 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 SF3B5Q9BWJ5 86 aaKnown RBP15.96■□□□□ 0.15
COL18A1-202ENST00000355480 ZNF768Q9H5H4 540 aaKnown RBP15.96■□□□□ 0.15
COL18A1-202ENST00000355480 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
COL18A1-202ENST00000355480 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 TMEM18Q96B42 140 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 NTNG2Q96CW9 530 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 SAP30LQ9HAJ7 183 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 NPTNQ9Y639 398 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 BRS3P32247 399 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 GZMKP49863 264 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 PPP1R1AQ13522 171 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 SLC25A30Q5SVS4 291 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 NAA60Q9H7X0 242 aa15.96■□□□□ 0.15
COL18A1-202ENST00000355480 DOCK2Q92608 1830 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 MS4A18H0YCH9 400 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 CDC42EP2O14613 210 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 GAMTQ14353 236 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 CD226Q15762 336 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 MS4A18Q3C1V0 323 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 OR5C1Q8NGR4 320 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 SLC25A22Q9H936 323 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 MTFP1Q9UDX5 166 aa15.96■□□□□ 0.14
COL18A1-202ENST00000355480 PTP4A1Q93096 173 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 PIK3IP1Q96FE7 263 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 VSTM2LQ96N03 204 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 A0A1W2PQD3 144 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 HSBP1O75506 76 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 SPNP16150 400 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 LGALS7P47929 136 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 LYZP61626 148 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 ZNF429Q86V71 674 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 OR52L2PQ8NGH6 319 aa15.95■□□□□ 0.14
COL18A1-202ENST00000355480 MED30Q96HR3 178 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms