RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 NMES1Q9C002 83 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 UQCC1Q9NVA1 299 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 NKX2-8O15522 239 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 B4GALT1P15291 398 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 FAHD2BQ6P2I3 314 aaPredicted RBP10.89□□□□□ -0.67
COLCA1-201ENST00000355430 OR10D3Q8NH80 312 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 FAHD2AQ96GK7 314 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 FOXB1Q99853 325 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 PLEKHA3Q9HB20 300 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 RASL12Q9NYN1 266 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 GAB2Q9UQC2 676 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 MAP1BP46821 2468 aaKnown RBP10.89□□□□□ -0.67
COLCA1-201ENST00000355430 FOXS1O43638 330 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 UPK3AO75631 287 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 DVL1P1P54792 670 aaPredicted RBP10.89□□□□□ -0.67
COLCA1-201ENST00000355430 FZD5Q13467 585 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 OR8G2PQ6IF36 304 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 CLEC9AQ6UXN8 241 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 SLCO1B1Q9Y6L6 691 aa10.89□□□□□ -0.67
COLCA1-201ENST00000355430 SPAG17Q6Q759 2223 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 SP1P08047 785 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 FAM185AQ8N0U4 392 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 OSR2Q8N2R0 312 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 OR1J1Q8NGS3 322 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 OR10J5Q8NHC4 309 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 OIT3Q8WWZ8 545 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF501Q96CX3 271 aaPredicted RBP10.88□□□□□ -0.67
COLCA1-201ENST00000355430 FBXL17Q9UF56 701 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 HLA-DOBP13765 273 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 H2BFSP57053 126 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 RAB1AP62820 205 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 GGNBP1Q5YKI7 109 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 LCN15Q6UWW0 184 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 UNQ9370/PRO34162Q6UXP9 181 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 AKR7LQ8NHP1 331 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 FAAP24Q9BTP7 215 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
COLCA1-201ENST00000355430 SUCNR1Q9BXA5 334 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 DEGS1O15121 323 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 CEBPEQ15744 281 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 BATFQ16520 125 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 MED9Q9NWA0 146 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 HOXA6P31267 233 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 NHLRC3Q5JS37 347 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF573Q86YE8 665 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 DEFB108BQ8NET1 73 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 PP6455Q8WZ26 134 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 GNPNAT1Q96EK6 184 aaPredicted RBP10.88□□□□□ -0.67
COLCA1-201ENST00000355430 UBTD1Q9HAC8 227 aa10.88□□□□□ -0.67
COLCA1-201ENST00000355430 KIR2DS1A0A191URI9 304 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ONECUT2O95948 504 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 LIFP15018 202 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 HNF1AP20823 631 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 KIR2DS4P43632 304 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 INSM1Q01101 510 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF273Q14593 569 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 KIR2DS1Q14954 304 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 MICBQ29980 383 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 BRICD5Q6PL45 260 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ALKBH3Q96Q83 286 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF426Q9BUY5 554 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 NFYBP25208 207 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 MAGEA5P43359 124 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 MOGAT2Q3SYC2 334 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 SLC25A26Q70HW3 274 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 MSI2Q96DH6 328 aaKnown RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 TGIF2Q9GZN2 237 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 TMEM100Q9NV29 134 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 VSIG8P0DPA2 414 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 SLC25A4P12235 298 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 HFEQ30201 348 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 THNSL2Q86YJ6 484 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 MITD1Q8WV92 249 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 EXTL1Q92935 676 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 PECRQ9BY49 303 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 PPP1R3CQ9UQK1 317 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 SCGB1D1O95968 90 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 BTCP35070 178 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 TMEM255AQ5JRV8 349 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 SOSTQ9BQB4 213 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 SCNM1Q9BWG6 230 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ALX4Q9H161 411 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 TIMM8BQ9Y5J9 83 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 A0A1W2PQD3 144 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 TXNDC12O95881 172 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ZNF345Q14585 488 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 BHLHA15Q7RTS1 189 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 TMEM171Q8WVE6 324 aa10.87□□□□□ -0.67
COLCA1-201ENST00000355430 APOBEC3DQ96AK3 386 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 ERRFI1Q9UJM3 462 aaPredicted RBP10.87□□□□□ -0.67
COLCA1-201ENST00000355430 A0A1W2PR77 199 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 DHRS3O75911 302 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 IAPPP10997 89 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 MLF1P58340 268 aa10.86□□□□□ -0.67
COLCA1-201ENST00000355430 OR2M7Q8NG81 312 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms