RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 IL11RAQ14626 422 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TMEM256Q8N2U0 113 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TTLQ8NG68 377 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 FNDC9Q8TBE3 224 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 SERINC2Q96SA4 455 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 C12orf57Q99622 126 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 CRB3Q9BUF7 120 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TRIM2Q9C040 744 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 PRO1933Q9H354 126 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 KLF2Q9Y5W3 355 aaPredicted RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 TRAV3A0A0B4J244 114 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 A0A1W2PN81 502 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 C9orf170A2RU37 121 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GAS8-AS1O95177 125 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 NUDT14O95848 222 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 HIST1H2ABP04908 130 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GATA2P23769 480 aaPredicted RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 CHRNA7P36544 502 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 GBX2P52951 348 aaPredicted RBP4.74□□□□□ -1.65
CD47-201ENST00000355354 CTAG1AP78358 180 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 MEDAGQ5VYS4 303 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 Q6ZS92 163 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 HIST3H2AQ7L7L0 130 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 DEFB104AQ8WTQ1 72 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 HIST1H2ACQ93077 130 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 Q9N2J8 555 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 PLSCR2Q9NRY7 297 aa4.74□□□□□ -1.65
CD47-201ENST00000355354 TMEM269A0A1B0GVZ9 245 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 TMEM14DPA8MWL7 114 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 GABARAPH6UMI1 98 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 M0R233 179 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 MFNGO00587 321 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 MPIG6BO95866 241 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ANXA3P12429 323 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 NQO2P16083 231 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 TAF13Q15543 124 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 LYPLAL1Q5VWZ2 237 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 MSANTD1Q6ZTZ1 278 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF627Q7L945 461 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 HDDC2Q7Z4H3 204 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 OR6N1Q8NGY5 312 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 RBM18Q96H35 190 aaKnown RBP4.73□□□□□ -1.65
CD47-201ENST00000355354 RASL10BQ96S79 203 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 CCNB1IP1Q9NPC3 277 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 HAO2Q9NYQ3 351 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 TAS2R10Q9NYW0 307 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 LOC102723996A0A087X1L8 192 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 TMEM218A2RU14 115 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 RBFOX2O43251 390 aaKnown RBP eCLIP4.73□□□□□ -1.65
CD47-201ENST00000355354 XRCC3O43542 346 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 NDUFB2O95178 105 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF134P52741 427 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ELOCQ15369 112 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF141Q15928 474 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ALKBH2Q6NS38 261 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 SLC18B1Q6NT16 456 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 LINC00299Q6ZSB3 139 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 KMT5CQ86Y97 462 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF676Q8N7Q3 588 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 LZICQ8WZA0 190 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 GAL3ST3Q96A11 431 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 NDC1Q9BTX1 674 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 GSKIPQ9P0R6 139 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 RABL2AQ9UBK7 228 aaPredicted RBP4.73□□□□□ -1.65
CD47-201ENST00000355354 A0A1B0GW64 132 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF724A8MTY0 619 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 K7EP13 123 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 OR2F2O95006 317 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 OR2T7P0C7T2 308 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 CENPAP49450 140 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 CASP6P55212 293 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ARPC4P59998 168 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 GNMTQ14749 295 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF565Q8N9K5 539 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ADAD1Q96M93 576 aaKnown RBP4.73□□□□□ -1.65
CD47-201ENST00000355354 C1orf198Q9H425 327 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ASF1BQ9NVP2 202 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 UBE2QL1A1L167 161 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 IGSF23A1L1A6 192 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 A6NNC1 897 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 CRHP06850 196 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 RAB15P59190 212 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 SGCGQ13326 291 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 TCF23Q7RTU1 214 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 P4HA3Q7Z4N8 544 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 CATSPERDQ86XM0 798 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 C10orf53Q8N6V4 93 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 TMEM217Q8N7C4 229 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 OR1J1Q8NGS3 322 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ABHD17AQ96GS6 310 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 NARS2Q96I59 477 aaKnown RBP4.73□□□□□ -1.65
CD47-201ENST00000355354 MTCH1Q9NZJ7 389 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 OR1A1Q9P1Q5 309 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 ZNF281Q9Y2X9 895 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
CD47-201ENST00000355354 hCG_1807616A0A1W2PRN6 198 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 C21orf140B9A014 251 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 GLCEO94923 617 aa4.72□□□□□ -1.65
CD47-201ENST00000355354 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
CD47-201ENST00000355354 CTSEP14091 401 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms