RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ZNF296Q8WUU4 475 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 TSPAN32Q96QS1 320 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 PECRQ9BY49 303 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 PQLC2LA1A4F0 135 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 MPTX1A8MV57 137 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 SIAH2O43255 324 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 NEURL1O76050 574 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 CDAP32320 146 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 CDKN2AP42771 156 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 SUCLG1P53597 346 aaKnown RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 INSM1Q01101 510 aaPredicted RBP11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 SH2D2AQ9NP31 389 aa11.33□□□□□ -0.6
SYNCRIP-201ENST00000355238 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 CDC42EP2O14613 210 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 ADAM11O75078 769 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 PXNP49023 591 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 ACSM6Q6P461 480 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 AAMDCQ9H7C9 122 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 BMP5P22003 454 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 TMEM215Q68D42 235 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 CPEB3Q8NE35 698 aaKnown RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF764Q96H86 408 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 RNF2Q99496 336 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MRPL58Q14197 206 aaKnown RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 TMEM91Q6ZNR0 172 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MYEOVQ96EZ4 313 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 EWSR1Q01844 656 aaKnown RBP eCLIP11.32□□□□□ -0.62e-7■■■■□ 24.5
SYNCRIP-201ENST00000355238 ZNF660Q6AZW8 331 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 ETV3LQ6ZN32 361 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 HSPB8Q9UJY1 196 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 A0A1B0GTH9 108 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 DIRC3C9JPN6 131 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 NRG2O14511 850 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 FGF2P09038 288 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 BCL3P20749 454 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 CXCL12P48061 93 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MLF2Q15773 248 aaPredicted RBP11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF880Q6PDB4 577 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 DHRS13Q6UX07 377 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 MENTQ9BUN1 341 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 NAGKQ9UJ70 344 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 ANXA10Q9UJ72 324 aa11.32□□□□□ -0.6
SYNCRIP-201ENST00000355238 SYNGR2O43760 224 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CDS2O95674 445 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR2T6Q8NHC8 308 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 SMIM17P0DL12 118 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 B4GALT1P15291 398 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CCR2P41597 374 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR1D5P58170 312 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZMIZ1Q9ULJ6 1067 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 WASHC3Q9Y3C0 194 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CBR3O75828 277 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 VDAC1P21796 283 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CAMPP49913 170 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 GNG3P63215 75 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 RBPJQ06330 500 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 RALYQ9UKM9 306 aaKnown RBP11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.67e-7■■■■■ 31.9
SYNCRIP-201ENST00000355238 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 GAPDHP04406 335 aaKnown RBP11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 HOXA6P31267 233 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CEACAM6P40199 344 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 PRDX4Q13162 271 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 OIT3Q8WWZ8 545 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 RGP1Q92546 391 aaPredicted RBP11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 SLC7A10Q9NS82 523 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 TAAR3PQ9P1P4 343 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 NRXN3Q9Y4C0 1643 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 CYB5R3P00387 301 aaPredicted RBP11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 KIR2DS2P43631 304 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 TMEM230Q96A57 120 aa11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 RCC2Q9P258 522 aaKnown RBP11.31□□□□□ -0.6
SYNCRIP-201ENST00000355238 NCBP2LA6PVI3 153 aaKnown RBP11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 FFAR1O14842 300 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 DMRTC1Q5HYR2 192 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 Q6ZNB5 142 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 SLC35E3Q7Z769 313 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 WBP2Q969T9 261 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 TOX2Q96NM4 488 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 PTP4A3O75365 173 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 CSNK1EP49674 416 aaKnown RBP11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 AGFG1P52594 562 aaKnown RBP11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
SYNCRIP-201ENST00000355238 ANKRD36CQ5JPF3 1778 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 394.4 ms