RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 PRKRAO75569 313 aaKnown RBP11.32□□□□□ -0.6
COL6A3-203ENST00000353578 C20orf196Q8IYI0 205 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 OR10G3Q8NGC4 313 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 SIPA1L1O43166 1804 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 JMJD7P0C870 316 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 ABHD17BQ5VST6 288 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 RGS7BPQ6MZT1 257 aaPredicted RBP11.32□□□□□ -0.6
COL6A3-203ENST00000353578 OSR2Q8N2R0 312 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 D2HGDHQ8N465 521 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 AQP10Q96PS8 301 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 HSPB9Q9BQS6 159 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
COL6A3-203ENST00000353578 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
COL6A3-203ENST00000353578 MASP2O00187 686 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 GAMTQ14353 236 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TWIST1Q15672 202 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ACSM5Q6NUN0 579 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PDPNQ86YL7 162 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 RHOVQ96L33 236 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TEX37Q96LM6 180 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 MIEN1Q9BRT3 115 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 UTS2O95399 124 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 AVPR2P30518 371 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 CLDN18P56856 261 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 SPNS3Q6ZMD2 512 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 BEND2Q8NDZ0 799 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 MRPL24Q96A35 216 aaKnown RBP11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TM4SF18Q96CE8 201 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 IGKV6-21A0A0C4DH24 114 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TSPAN13O95857 204 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 HMGN2P46Q86SG4 172 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ISOC2Q96AB3 205 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 LANCL2Q9NS86 450 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TRBV11-1A0A0K0K1C0 115 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 FCMRO60667 390 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 NTSR1P30989 418 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 RPS15P62841 145 aaKnown RBP11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 IL19Q9UHD0 177 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 NTHL1P78549 312 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 HHEXQ03014 270 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 RAB32Q13637 225 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 CISD1Q9NZ45 108 aaKnown RBP11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ZNF835Q9Y2P0 537 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 CXCL3P19876 107 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 NPY1RP25929 384 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PXNP49023 591 aaPredicted RBP11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ISXQ2M1V0 245 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 DNAJC4Q9NNZ3 241 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 NTNG1Q9Y2I2 539 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PRR35P0CG20 571 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PPP2CAP67775 309 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ZNF718Q3SXZ3 478 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 Q56UQ5 140 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 OR5D18Q8NGL1 313 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 SGMS2Q8NHU3 365 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 HES4Q9HCC6 221 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 IGLON5A6NGN9 336 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 IRF3Q14653 427 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ACKR1Q16570 336 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PUSL1Q8N0Z8 303 aaKnown RBP11.31□□□□□ -0.6
COL6A3-203ENST00000353578 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 OR13C6PQ8NH95 151 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 PBOV1Q9GZY1 135 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 HS3ST2Q9Y278 367 aa11.31□□□□□ -0.6
COL6A3-203ENST00000353578 GPR37O15354 613 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 HCRTR1O43613 425 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 EMP1P54849 157 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 RABEPKQ7Z6M1 372 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 TP53I13Q8NBR0 393 aaPredicted RBP11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ZBTB34Q8NCN2 500 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ANAPC13Q9BS18 74 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 CA10Q9NS85 328 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 PATJQ8NI35 1801 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
COL6A3-203ENST00000353578 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ABHD1Q96SE0 405 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 OR2D2Q9H210 308 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 TMEM272A0A1B0GTI8 110 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 A8MWL6 223 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 LDLRAD3Q86YD5 345 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 MDGA1Q8NFP4 955 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.3□□□□□ -0.6
COL6A3-203ENST00000353578 RARRES2Q99969 163 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 M0R135 149 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ZBTB25P24278 435 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 LY6G5CQ5SRR4 150 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 GDF6Q6KF10 455 aaPredicted RBP11.3□□□□□ -0.6
COL6A3-203ENST00000353578 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
COL6A3-203ENST00000353578 ZNF799Q96GE5 643 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms