RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DHRS7CA6NNS2 312 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 H0YIG0 161 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PGCP20142 388 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 IL11P20809 199 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 UCP2P55851 309 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 COL10A1Q03692 680 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CLN3Q13286 438 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 SPIN3Q5JUX0 258 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF321PQ8N8H1 164 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 C11orf40Q8WZ69 217 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM18Q96B42 140 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 ZBP1Q9H171 429 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 FBRSQ9HAH7 460 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 F5P12259 2224 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 C2orf72A6NCS6 295 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PPP5D1E7EU14 171 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 WISP1O95388 367 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 HLA-HP01893 362 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 OPN1LWP04000 364 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CTSDP07339 412 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-201ENST00000352993 NPSP0C0P6 89 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 FCGR2AP12318 317 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PNLIPP16233 465 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 POLR2HP52434 150 aaKnown RBP6.7□□□□□ -1.34
BRCA1-201ENST00000352993 FGF8P55075 233 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-201ENST00000352993 HSD11B2P80365 405 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 HNF4GQ14541 408 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PRTGQ2VWP7 1150 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 DMRTA1Q5VZB9 504 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 SLC35E3Q7Z769 313 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 SFTPA2Q8IWL1 248 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 BEND2Q8NDZ0 799 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PIGTQ969N2 578 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 SHDQ96IW2 340 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 OR5B12Q96R08 314 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PECRQ9BY49 303 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CUTCQ9NTM9 273 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 NOTCH4Q99466 2003 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 IGKV1D-43A0A0B4J1Z2 117 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CRYM-AS1A6NIL9 109 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CEBPZOSA8MTT3 80 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 RPL36A-HNRNPH2H7BZ11 118 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CST2P09228 141 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 IL13RA2Q14627 380 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 P2RY6Q15077 328 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF542PQ5EBM4 170 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 C1QL2Q7Z5L3 287 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 C5orf24Q7Z6I8 188 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF519Q8TB69 540 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 BAHD1Q8TBE0 780 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-201ENST00000352993 TMEM208Q9BTX3 173 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 RTN4RQ9BZR6 473 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 ARV1Q9H2C2 271 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 NAA60Q9H7X0 242 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 FAM60AQ9NP50 221 aa6.7□□□□□ -1.34
BRCA1-201ENST00000352993 UBE2J1Q9Y385 318 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-201ENST00000352993 PHF3Q92576 2039 aaKnown RBP6.7□□□□□ -1.34
BRCA1-201ENST00000352993 CNOT4O95628 575 aaKnown RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 HBE1P02100 147 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 HSPB1P04792 205 aaKnown RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 DBHP09172 617 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 NKX2-1P43699 371 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 GPR3P46089 330 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 SLC6A8P48029 635 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 GNG10P50151 68 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 TLE3Q04726 772 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 HERPUD1Q15011 391 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 DNLZQ5SXM8 178 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 CST9LP1Q5W188 147 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 SPSB3Q6PJ21 355 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 SLC16A14Q7RTX9 510 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 OR11L1Q8NGX0 322 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 LIN37Q96GY3 246 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 NKX2-4Q9H2Z4 354 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 RP1P56715 2156 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 MED12Q93074 2177 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 CEACAM18A8MTB9 384 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 H3BML4 177 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 H3BP45 60 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 PLPP3O14495 311 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 MT-ATP6P00846 226 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 GCGP01275 180 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 RPLP1P05386 114 aaKnown RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 CTHP32929 405 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 ZNF121P58317 390 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 HERV-K104P61576 105 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 C1orf53Q5VUE5 145 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 BTNL3Q6UXE8 466 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 C20orf196Q8IYI0 205 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 SLC38A9Q8NBW4 561 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 ADAMTS18Q8TE60 1221 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 SYT3Q9BQG1 590 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 DUSP15Q9H1R2 295 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-201ENST00000352993 FAM206AQ9NX38 181 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 FUT9Q9Y231 359 aa6.69□□□□□ -1.34
BRCA1-201ENST00000352993 A0A0J9YY10 115 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms