RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 SNRPCP09234 159 aaKnown RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 GP1BBP13224 206 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 KLK2P20151 261 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 RGS19P49795 217 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 ZP4Q12836 540 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 LINC00346Q8IVM7 164 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 CYB561D1Q8N8Q1 229 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 SLAMF6Q96DU3 332 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 SYT3Q9BQG1 590 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 ZNF2Q9BSG1 426 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 FOXQ1Q9C009 403 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 NAA60Q9H7X0 242 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 LANCL2Q9NS86 450 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 CYB5R3P00387 301 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 OPN1MWP04001 364 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 OPN1MW2P0DN77 364 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 OPN1MW3P0DN78 364 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 SFTPDP35247 375 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 POLR2HP52434 150 aaKnown RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 MRPL52Q86TS9 123 aaKnown RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 C17orf82Q86X59 251 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 OR14L1PQ8NHC6 308 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 DAZLQ92904 295 aaKnown RBP13.08□□□□□ -0.32
TRAF3-202ENST00000351691 TM2D1Q9BX74 207 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 CTDSP1Q9GZU7 261 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 HSF4Q9ULV5 492 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 FREM3P0C091 2139 aa13.08□□□□□ -0.32
TRAF3-202ENST00000351691 SHISA7A6NL88 538 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 ZNF732B4DXR9 585 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 HSPA12AO43301 675 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 AMBPP02760 352 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 HPNP05981 417 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 QDPRP09417 244 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 PGCP20142 388 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 CSNK1A1P48729 337 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 TAF9Q16594 264 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 ZNF248Q8NDW4 579 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 OR51T1Q8NGJ9 327 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 CLDND2Q8NHS1 167 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 ASB10Q8WXI3 467 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 ADGRG7Q96K78 797 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 KLHDC3Q9BQ90 382 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 C11orf1Q9H5F2 150 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 AK3Q9UIJ7 227 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 A0A1W2PQD3 144 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 PGA4P0DJD7 388 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 PGA5P0DJD9 388 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 ATP6V0CP27449 155 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 NOVA1P51513 510 aaKnown RBP13.07□□□□□ -0.32
TRAF3-202ENST00000351691 EWSR1Q01844 656 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAF3-202ENST00000351691 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 GALNTL5Q7Z4T8 443 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 FBXL14Q8N1E6 418 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 BOD1Q96IK1 185 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 NXF5Q9H1B4 397 aaKnown RBP13.07□□□□□ -0.32
TRAF3-202ENST00000351691 OR14J1Q9UGF5 321 aa13.07□□□□□ -0.32
TRAF3-202ENST00000351691 TMED7-TICAM2A0A0A6YYA0 188 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 TRAV1-1A0A0B4J248 108 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 A0A1B0GU03 582 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 EREGO14944 169 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 CYTIPO60759 359 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 TK1P04183 234 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 METTL15P1P0C7V9 234 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 GIMD1P0DJR0 217 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 CEACAM1P13688 526 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 PNLIPP16233 465 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 CCL1P22362 96 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 DAP3P51398 398 aaKnown RBP13.06□□□□□ -0.32
TRAF3-202ENST00000351691 GAGE1Q13065 139 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 GNMTQ14749 295 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 RAB35Q15286 201 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 LIAT1Q6ZQX7 453 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 SLC25A26Q70HW3 274 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 SYT13Q7L8C5 426 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 RNF144BQ7Z419 303 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 CARFQ8N187 725 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 OR1P1Q8NH06 330 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 DNASE2BQ8WZ79 361 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 GNPNAT1Q96EK6 184 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-202ENST00000351691 KCNK17Q96T54 332 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 TBL1XR1Q9BZK7 514 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 SRD5A3Q9H8P0 318 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 PNO1Q9NRX1 252 aaKnown RBP13.06□□□□□ -0.32
TRAF3-202ENST00000351691 VAX2Q9UIW0 290 aa13.06□□□□□ -0.32
TRAF3-202ENST00000351691 RCL1Q9Y2P8 373 aaKnown RBP13.06□□□□□ -0.32
TRAF3-202ENST00000351691 COL6A3P12111 3177 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 IGKV3D-11A0A0A0MRZ8 115 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 A0A1B0GV50 99 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 ZNF878C9JN71 531 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 IL18BPO95998 194 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 IGKV3-11P04433 115 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 FOXF1Q12946 379 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
TRAF3-202ENST00000351691 LANCL3Q6ZV70 420 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms