RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 GREM1O60565 184 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 SLC25A6P12236 298 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 F2RP25116 425 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 HGDQ93099 445 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 IGHV3-43A0A0B4J1X8 118 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 J3QR89 54 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 IGHV3-43DP0DP04 118 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 CD37P11049 281 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 Q3ZCU0 254 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 RPUSD3Q6P087 351 aaKnown RBP16.48■□□□□ 0.23
UBE3C-201ENST00000348165 PRRX2Q99811 253 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 SOX7Q9BT81 388 aa16.48■□□□□ 0.23
UBE3C-201ENST00000348165 H0Y8G0 127 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 PDCD6O75340 191 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 FGF7P21781 194 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 KCNK15Q9H427 330 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 MYOZ1Q9NP98 299 aaPredicted RBP16.47■□□□□ 0.23
UBE3C-201ENST00000348165 SLC16A12Q6ZSM3 486 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 GTF2H5Q6ZYL4 71 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 CMTM3Q96MX0 182 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 SLC26A1Q9H2B4 701 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 CENPVL1A0A0U1RR11 272 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 MASP2O00187 686 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 NDUFB6O95139 128 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 PHYHD1Q5SRE7 291 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 ZNF787Q6DD87 383 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 UQCC3Q6UW78 93 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 GLDNQ6ZMI3 551 aaPredicted RBP16.47■□□□□ 0.23
UBE3C-201ENST00000348165 SLC16A13Q7RTY0 426 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 RXFP4Q8TDU9 374 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 OIT3Q8WWZ8 545 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 SULT1A3P0DMM9 295 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 SULT1A4P0DMN0 295 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 OR5AP2Q8NGF4 316 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 CASP8AP2Q9UKL3 1982 aa16.47■□□□□ 0.23
UBE3C-201ENST00000348165 NPIPB8E9PQR5 432 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 FCGR3BO75015 233 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 C1QCP02747 245 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 GABRA1P14867 456 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 PNLIPP16233 465 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.23
UBE3C-201ENST00000348165 FPR2P25090 351 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 C4orf17Q53FE4 359 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 OR6S1Q8NH40 331 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 MRPL22Q9NWU5 206 aaKnown RBP16.46■□□□□ 0.23
UBE3C-201ENST00000348165 GP1BAP07359 652 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 ISXQ2M1V0 245 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 ZNF501Q96CX3 271 aaPredicted RBP16.46■□□□□ 0.23
UBE3C-201ENST00000348165 ZNF331Q9NQX6 463 aaPredicted RBP16.46■□□□□ 0.23
UBE3C-201ENST00000348165 CES1P1Q9UKY3 287 aa16.46■□□□□ 0.23
UBE3C-201ENST00000348165 PCMT1P22061 227 aa16.46■□□□□ 0.22
UBE3C-201ENST00000348165 ASCL1P50553 236 aa16.46■□□□□ 0.22
UBE3C-201ENST00000348165 DMKNQ6E0U4 476 aaPredicted RBP16.46■□□□□ 0.22
UBE3C-201ENST00000348165 GVQW1Q8N7I0 195 aa16.46■□□□□ 0.22
UBE3C-201ENST00000348165 TRAF4Q9BUZ4 470 aaPredicted RBP16.46■□□□□ 0.22
UBE3C-201ENST00000348165 SF3B5Q9BWJ5 86 aaKnown RBP16.46■□□□□ 0.22
UBE3C-201ENST00000348165 COL5A3P25940 1745 aaPredicted RBP16.46■□□□□ 0.22
UBE3C-201ENST00000348165 IGKV1-8A0A0C4DH67 115 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 TIGITQ495A1 244 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 POM121L2Q96KW2 1035 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 WISP3O95389 354 aaPredicted RBP16.45■□□□□ 0.22
UBE3C-201ENST00000348165 ONECUT2O95948 504 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 SLC25A4P12235 298 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 DGAT2L6Q6ZPD8 337 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 ABHD1Q96SE0 405 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 ICAM5Q9UMF0 924 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 TMEM211Q6ICI0 200 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 MRGPRDQ8TDS7 321 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 PDGFBP01127 241 aaPredicted RBP16.45■□□□□ 0.22
UBE3C-201ENST00000348165 FABP9Q0Z7S8 132 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 VMA21Q3ZAQ7 101 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 NUFIP2Q7Z417 695 aaKnown RBP16.45■□□□□ 0.22
UBE3C-201ENST00000348165 NECAP1Q8NC96 275 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 BPIFCQ8NFQ6 507 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 OR10D4PQ8NGN7 298 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 FRRS1LQ9P0K9 344 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 CYB5R1Q9UHQ9 305 aa16.45■□□□□ 0.22
UBE3C-201ENST00000348165 OR10AD1Q8NGE0 317 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 ZNF835Q9Y2P0 537 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 RTTNQ86VV8 2226 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 COL11A2P13942 1736 aaPredicted RBP16.44■□□□□ 0.22
UBE3C-201ENST00000348165 OR3A1P47881 315 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 PPP1R1AQ13522 171 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 KDF1Q8NAX2 398 aaPredicted RBP16.44■□□□□ 0.22
UBE3C-201ENST00000348165 COX7A1P24310 79 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 DHRS2Q13268 280 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 C8orf82Q6P1X6 216 aaPredicted RBP16.44■□□□□ 0.22
UBE3C-201ENST00000348165 MOB1BQ7L9L4 216 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 OR2M3Q8NG83 312 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 OR4C5Q8NGB2 326 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 RPEQ96AT9 228 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 MOB3AQ96BX8 217 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 TREM2Q9NZC2 230 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 BPIFB3P59826 476 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 ZNF770Q6IQ21 691 aaPredicted RBP16.44■□□□□ 0.22
UBE3C-201ENST00000348165 ZNF721Q8TF20 911 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 SPTBP11277 2137 aa16.44■□□□□ 0.22
UBE3C-201ENST00000348165 OR5B21A6NL26 309 aa16.43■□□□□ 0.22
UBE3C-201ENST00000348165 ACTL6AO96019 429 aa16.43■□□□□ 0.22
UBE3C-201ENST00000348165 LSM6P62312 80 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms