RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PARP11Q9NR21 331 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 A0A1W2PPH5 198 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 CXCL13O43927 109 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 FUT3P21217 361 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
NUP50-201ENST00000347635 C20orf196Q8IYI0 205 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 ZNRF4Q8WWF5 429 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 AQP3Q92482 292 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 TGIF2Q9GZN2 237 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 ZNF98A6NK75 572 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 MFNGO00587 321 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 ZNF766Q5HY98 468 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 TMPRSS5Q9H3S3 457 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 OR5H15A6NDH6 313 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 PATE3B3GLJ2 98 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 NXPH2O95156 264 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 HAAOP46952 286 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 LIMK1P53667 647 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 SLC16A13Q7RTY0 426 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 FSCN3Q9NQT6 498 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 TMEM74BQ9NUR3 256 aa13.01□□□□□ -0.33
NUP50-201ENST00000347635 IGLV1-36A0A0B4J1U3 117 aa13□□□□□ -0.33
NUP50-201ENST00000347635 ZNF727A8MUV8 499 aa13□□□□□ -0.33
NUP50-201ENST00000347635 CST7O76096 145 aa13□□□□□ -0.33
NUP50-201ENST00000347635 F12P00748 615 aaPredicted RBP13□□□□□ -0.33
NUP50-201ENST00000347635 HOGA1Q86XE5 327 aa13□□□□□ -0.33
NUP50-201ENST00000347635 ZNF610Q8N9Z0 462 aa13□□□□□ -0.33
NUP50-201ENST00000347635 PPP5D1E7EU14 171 aa13□□□□□ -0.33
NUP50-201ENST00000347635 C1orf100Q5SVJ3 147 aa13□□□□□ -0.33
NUP50-201ENST00000347635 ANXA10Q9UJ72 324 aa13□□□□□ -0.33
NUP50-201ENST00000347635 A0A1W2PR77 199 aa13□□□□□ -0.33
NUP50-201ENST00000347635 ISG15P05161 165 aa13□□□□□ -0.33
NUP50-201ENST00000347635 BRICD5Q6PL45 260 aa13□□□□□ -0.33
NUP50-201ENST00000347635 SAP25Q8TEE9 199 aa13□□□□□ -0.33
NUP50-201ENST00000347635 MRPL22Q9NWU5 206 aaKnown RBP13□□□□□ -0.33
NUP50-201ENST00000347635 PPP1R3CQ9UQK1 317 aa13□□□□□ -0.33
NUP50-201ENST00000347635 C3orf85A0A1B0GTC6 90 aa13□□□□□ -0.33
NUP50-201ENST00000347635 A8MXK9 166 aa13□□□□□ -0.33
NUP50-201ENST00000347635 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
NUP50-201ENST00000347635 OR2T2Q6IF00 324 aa13□□□□□ -0.33
NUP50-201ENST00000347635 EXTL1Q92935 676 aa13□□□□□ -0.33
NUP50-201ENST00000347635 CACNA1CQ13936 2221 aa13□□□□□ -0.33
NUP50-201ENST00000347635 TRGV5A0A0B4J1U4 118 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 SLC22A20A6NK97 555 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 SRD5A2P31213 254 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 FDX2Q6P4F2 183 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 CLEC9AQ6UXN8 241 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 FAM219AQ8IW50 185 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 ZDHHC23Q8IYP9 409 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 OR2AE1Q8NHA4 323 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 C5orf49A4QMS7 147 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 ZNF883P0CG24 379 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 FAM157BP0CG42 384 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 IAPPP10997 89 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 P2RY1P47900 373 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 GAB4Q2WGN9 574 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 SPANXN5Q5MJ07 72 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 VAX1Q5SQQ9 334 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 DMBX1Q8NFW5 382 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 OR6S1Q8NH40 331 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
NUP50-201ENST00000347635 CABLES2Q9BTV7 478 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 CRLF2Q9HC73 371 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
NUP50-201ENST00000347635 CD74P04233 296 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 STPG1Q5TH74 334 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 RDH5Q92781 318 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 NRIP2Q9BQI9 281 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 CD8AP01732 235 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 SMIM6P0DI80 62 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 CALCRP30988 508 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 H3F3AP84243 136 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 ZP4Q12836 540 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 RNPS1Q15287 305 aaKnown RBP12.99□□□□□ -0.33
NUP50-201ENST00000347635 TRIB1Q96RU8 372 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 DDA1Q9BW61 102 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 SAMD10Q9BYL1 202 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 TMEM100Q9NV29 134 aa12.99□□□□□ -0.33
NUP50-201ENST00000347635 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 H7BYZ3 331 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 EFSO43281 561 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 LYPD3O95274 346 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 PDCD1Q15116 288 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 BATFQ16520 125 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 C4orf17Q53FE4 359 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 LINC00114Q6XXX2 140 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 OR2C3Q8N628 320 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 TMEM104Q8NE00 496 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 MRPL24Q96A35 216 aaKnown RBP12.98□□□□□ -0.33
NUP50-201ENST00000347635 ZNF501Q96CX3 271 aaPredicted RBP12.98□□□□□ -0.33
NUP50-201ENST00000347635 RIMS4Q9H426 269 aaPredicted RBP12.98□□□□□ -0.33
NUP50-201ENST00000347635 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 hCG_1809904A0A1W2PP81 198 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 A0A1W2PR64 198 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 A0A1W2PRV1 198 aa12.98□□□□□ -0.33
NUP50-201ENST00000347635 FAM24AA6NFZ4 105 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms