RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FAM90A14PP0C7W9 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAM90A24PP0C7X0 464 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 NAT1P18440 290 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 BCL3P20749 454 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 AGAP20933 346 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 CHATP28329 748 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 UQCRFS1P47985 274 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 KLF3P57682 345 aaPredicted RBP9.32□□□□□ -0.92
ECM1-201ENST00000346569 AP3S2P59780 193 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FGF12P61328 243 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 ARL6IP1Q15041 203 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 TAF9Q16594 264 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 PLA1AQ53H76 456 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 OLFML2AQ68BL7 652 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 MRPL24Q96A35 216 aaKnown RBP9.32□□□□□ -0.92
ECM1-201ENST00000346569 LRRC46Q96FV0 321 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 ZNF442Q9H7R0 627 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 FAIMQ9NVQ4 179 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 TAS2R8Q9NYW2 309 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 ZNF581Q9P0T4 197 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 ANAPC10Q9UM13 185 aa9.32□□□□□ -0.92
ECM1-201ENST00000346569 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 SHISA9B4DS77 424 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 F5H5P2 479 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 TRAPPC2LH3BP13 241 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 J3QKU1 62 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 GEMIN2O14893 280 aaKnown RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 CYB5AP00167 134 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 PGA5P0DJD9 388 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 PMELP40967 661 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CD200P41217 278 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 RBM11P57052 281 aaKnown RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 SNTB1Q13884 538 aaKnown RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 PIGYQ3MUY2 71 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 VHLLQ6RSH7 139 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 SLC22A25Q6T423 547 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ZNF808Q8N4W9 903 aaPredicted RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ITLN2Q8WWU7 325 aaPredicted RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 CA10Q9NS85 328 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 TAAR3PQ9P1P4 343 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 NLKQ9UBE8 527 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 POU2F3Q9UKI9 436 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 DIDO1Q9BTC0 2240 aaKnown RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 FAM240BA0A1B0GVZ2 78 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 MEIS3P1A6NDR6 274 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 NAP1L6A6NFF2 107 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ZSCAN5BA6NJL1 495 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CENPXA8MT69 81 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 SERPINE3A8MV23 424 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CDIPTO14735 213 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CD74P04233 296 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 GRPP07492 148 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CSF1P09603 554 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 GABRR1P24046 479 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 CFHR2P36980 270 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 SELENOVP59797 346 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ACTBP60709 375 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ACTG1P63261 375 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ADIPOQQ15848 244 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 PCGF3Q3KNV8 242 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 C6orf201Q7Z4U5 140 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 DMRTC2Q8IXT2 367 aaPredicted RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 FAM58AQ8N1B3 248 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 GVQW1Q8N7I0 195 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CELF2-AS1Q8N7Q2 184 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 OR10AD1Q8NGE0 317 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 NUDCD2Q8WVJ2 157 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 GTF3AQ92664 365 aaKnown RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 PLPPR2Q96GM1 343 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ZNF488Q96MN9 340 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 SYT3Q9BQG1 590 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 CACNG6Q9BXT2 260 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 PLK3Q9H4B4 646 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 ESRP2Q9H6T0 727 aaKnown RBP9.31□□□□□ -0.92
ECM1-201ENST00000346569 PLEKHJ1Q9NW61 149 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 NKIRAS2Q9NYR9 191 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 HIVEP3Q5T1R4 2406 aa9.31□□□□□ -0.92
ECM1-201ENST00000346569 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.3□□□□□ -0.92
ECM1-201ENST00000346569 E7EQL1 145 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 SIAH2O43255 324 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 ZG16O60844 167 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 PDCD6O75340 191 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 CLDN14O95500 239 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 CD3DP04234 171 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 FUT3P21217 361 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 CBX5P45973 191 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 MZT1Q08AG7 82 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 IL13RA2Q14627 380 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 PDCD1Q15116 288 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 MPPED2Q15777 294 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 TRAPPC6BQ86SZ2 158 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 GLCCI1Q86VQ1 547 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 Q8IYB0 196 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 BATF2Q8N1L9 274 aa9.3□□□□□ -0.92
ECM1-201ENST00000346569 POC1AQ8NBT0 407 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms