RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 OR3A4PP47883 348 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 UBE2G1P62253 170 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 UBE2IP63279 158 aaKnown RBP9.63□□□□□ -0.87
CLCN6-202ENST00000346436 IAH1Q2TAA2 248 aaPredicted RBP9.63□□□□□ -0.87
CLCN6-202ENST00000346436 LGALSLQ3ZCW2 172 aaPredicted RBP9.63□□□□□ -0.87
CLCN6-202ENST00000346436 PABPC1L2AQ5JQF8 200 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 SUMF1Q8NBK3 374 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 AQP7P3A6NL99 342 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 TXNL1O43396 289 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 DFFBO76075 338 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 NDUFB6O95139 128 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 CRHP06850 196 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 PF4V1P10720 104 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 FOXL2P58012 376 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 OGFOD3Q6PK18 319 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 OTOSQ8NHW6 89 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 LPAR2Q9HBW0 351 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 TCRBV16S1A1N1A0A5B0 115 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 OR2M5A3KFT3 312 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 ZFP92A6NM28 416 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 SNAPINO95295 136 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 NAAAQ02083 359 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF529Q6P280 563 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 MARC2Q969Z3 335 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 PBOV1Q9GZY1 135 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF665Q9H7R5 613 aa9.63□□□□□ -0.87
CLCN6-202ENST00000346436 TMEM272A0A1B0GTI8 110 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FBXW9Q5XUX1 488 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 SLC38A9Q8NBW4 561 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 ADTRPQ96IZ2 230 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 GAR1Q9NY12 217 aaKnown RBP9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FKBP11Q9NYL4 201 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FRRS1LQ9P0K9 344 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 MYLKQ15746 1914 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 ADRB1P08588 477 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 OR5G3P0C626 314 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 ERVFRD-1P60508 538 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 HLXQ14774 488 aaPredicted RBP9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FAM219AQ8IW50 185 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 CDH26Q8IXH8 852 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 OSR2Q8N2R0 312 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 VSTM2AQ8TAG5 236 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 A0A1W2PN81 502 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 SNRPGP15A8MWD9 76 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 HBE1P02100 147 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FBP1P09467 338 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 CBR1P16152 277 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 SPINK2P20155 84 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 CHRNA7P36544 502 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 CLLU1Q5K131 121 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 ARTNQ5T4W7 220 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 HSD17B11Q8NBQ5 300 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 OR51H1Q8NH63 302 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 NKX6-2Q9C056 277 aaPredicted RBP9.62□□□□□ -0.87
CLCN6-202ENST00000346436 SCPEP1Q9HB40 452 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 A0A1W2PQD3 144 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FOXH1O75593 365 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 CTAG2O75638 210 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 IGKV1D-16P01601 117 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 GALP22466 123 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 CLINT1Q14677 625 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 EXOSC3Q9NQT5 275 aaKnown RBP9.62□□□□□ -0.87
CLCN6-202ENST00000346436 TUBG2Q9NRH3 451 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 FZR1Q9UM11 496 aa9.62□□□□□ -0.87
CLCN6-202ENST00000346436 TRAV8-7A0A075B6U6 113 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 LRRC3CA6NJW4 275 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 H3F3CQ6NXT2 135 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 OR8B4Q96RC9 309 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 ANKRD36A6QL64 1941 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 CYR61O00622 381 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 TRAF3IP2O43734 574 aaPredicted RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 VDAC1P21796 283 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 NANOS3P60323 173 aaKnown RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF788Q6ZQV5 615 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 SSX9Q7RTT3 188 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 SLC38A6Q8IZM9 456 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 GVQW1Q8N7I0 195 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 RNF141Q8WVD5 230 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 LINC00052Q96N35 136 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 TIMM9Q9Y5J7 89 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 SLC17A2O00624 439 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 GPM6AP51674 278 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 MRPS18AQ9NVS2 196 aaKnown RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 ZNF354AO60765 605 aaPredicted RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 CTSBP07858 339 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 CD96P40200 585 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 FAM214BQ7L5A3 538 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 KDF1Q8NAX2 398 aaPredicted RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PATZ1Q9HBE1 687 aaKnown RBP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 KCNE5Q9UJ90 142 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 KLHDC2Q9Y2U9 406 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PPIAL4EA0A075B759 164 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PPIAL4DF5H284 164 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 TMPRSS2O15393 492 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 OIP5O43482 229 aa9.61□□□□□ -0.87
CLCN6-202ENST00000346436 PPIAL4FP0DN26 164 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms