RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 GRK1Q15835 563 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TMEM128Q5BJH2 165 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF585AQ6P3V2 769 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 Q8NFD4 153 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SLAMF9Q96A28 289 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ELMOD3Q96FG2 381 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HIST1H2AAQ96QV6 131 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PHB2Q99623 299 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DKK4Q9UBT3 224 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 EDARQ9UNE0 448 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ERVH48-1M5A8F1 160 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR7C1O76099 320 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DUS4LO95620 317 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CXCL2P19875 107 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PI3P19957 117 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 BCL3P20749 454 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FPR2P25090 351 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OPRM1P35372 400 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 THOC7Q6I9Y2 204 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR2A2Q6IF42 318 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 Q6ZS92 163 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR6K3Q8NGY3 331 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SNIP1Q8TAD8 396 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5P3Q8WZ94 311 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SCGB3A2Q96PL1 93 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DMXL2Q8TDJ6 3036 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 APC2O95996 2303 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FAM221AA4D161 298 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5H14A6NHG9 310 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PROB1E7EW31 1015 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 F8VVB4 439 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 F8VWA3 439 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FCGR3AP08637 254 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FUT3P21217 361 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DTYMKP23919 212 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SEC61A1P61619 476 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 LPCAT3Q6P1A2 487 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TMEM200AQ86VY9 491 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TMEM230Q96A57 120 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 DPCDQ9BVM2 203 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MPC1Q9Y5U8 109 aa12.11□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FXYD6-FXYD2A0A087WZ82 144 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MCRIP1C9JLW8 97 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CCSO14618 274 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MPC2O95563 127 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PPP3CBP16298 524 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 COX5AP20674 150 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 NSUN5P2Q63ZY6 315 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ELP2Q6IA86 826 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 INO80CQ6PI98 192 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF680Q8NEM1 530 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 POM121Q96HA1 1249 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FXYD6Q9H0Q3 95 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CDH20Q9HBT6 801 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 J3QW42 95 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 K7EM74 188 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 L7N2F9 121 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ARPC5O15511 151 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SMPD2O60906 423 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 IFNA7P01567 189 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HLA-GP17693 338 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SPINK2P20155 84 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CA6P23280 308 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 GMFBP60983 142 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SORDQ00796 357 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 KCTD9Q7L273 389 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ZNF442Q9H7R0 627 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PLSCR4Q9NRQ2 329 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ESPL1Q14674 2120 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 ACACAQ13085 2346 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TRAPPC2LH3BP13 241 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 M0R233 179 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 SYNGR1O43759 233 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 TNFSF13O75888 250 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 CD8AP01732 235 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 OR5H8P0DN80 308 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 GLRA1P23415 457 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 HOXC12P31275 282 aa12.09□□□□□ -0.47
CDK5RAP1-202ENST00000346416 FGF12P61328 243 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms