RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GPR176Q14439 515 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 RSU1Q15404 277 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 TIMM50Q3ZCQ8 353 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 LRRC10Q5BKY1 277 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 SYT6Q5T7P8 510 aaPredicted RBP9.89□□□□□ -0.83
SNCA-202ENST00000345009 ATPAF1Q5TC12 328 aaPredicted RBP9.89□□□□□ -0.83
SNCA-202ENST00000345009 GLT8D1Q68CQ7 371 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 ACP7Q6ZNF0 438 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 C1orf229Q6ZS94 237 aaPredicted RBP9.89□□□□□ -0.83
SNCA-202ENST00000345009 GLCCI1Q86VQ1 547 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 FAM58AQ8N1B3 248 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 JAGN1Q8N5M9 183 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 PXT1Q8NFP0 134 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 OR51A2Q8NGJ7 313 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 OR5D18Q8NGL1 313 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 TNFAIP8L1Q8WVP5 186 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 SLAMF9Q96A28 289 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 RFT1Q96AA3 541 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 UQCC2Q9BRT2 126 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 SSBP3Q9BWW4 388 aaPredicted RBP9.89□□□□□ -0.83
SNCA-202ENST00000345009 FAM192AQ9GZU8 254 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 WDR13Q9H1Z4 485 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 SMURF1Q9HCE7 757 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 MTCH1Q9NZJ7 389 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 KAAG1Q9UBP8 84 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 OR5V1Q9UGF6 321 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 GSTK1Q9Y2Q3 226 aa9.89□□□□□ -0.83
SNCA-202ENST00000345009 TRAV8-7A0A075B6U6 113 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 TRDV1A0A1B0GX56 115 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 GABRPO00591 440 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 PDCD5O14737 125 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 SPRY1O43609 319 aaPredicted RBP9.88□□□□□ -0.83
SNCA-202ENST00000345009 SC5DO75845 299 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 CSTBP04080 98 aaKnown RBP9.88□□□□□ -0.83
SNCA-202ENST00000345009 MYL9P24844 172 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 IL2RGP31785 369 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 ERVK11-1P61568 191 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 IL13RA1P78552 427 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 FABP5Q01469 135 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 SSX1Q16384 188 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 SPIN3Q5JUX0 258 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 STUMQ69YW2 141 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 OR5T2Q8NGG2 359 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 ANGPTL6Q8NI99 470 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 EMG1Q92979 244 aaKnown RBP9.88□□□□□ -0.83
SNCA-202ENST00000345009 MSI2Q96DH6 328 aaKnown RBP9.88□□□□□ -0.83
SNCA-202ENST00000345009 ZNF488Q96MN9 340 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 CCL13Q99616 98 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 METTL9Q9H1A3 318 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 HES4Q9HCC6 221 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 EXOSC4Q9NPD3 245 aaKnown RBP9.88□□□□□ -0.83
SNCA-202ENST00000345009 KCNS2Q9ULS6 477 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 ING4Q9UNL4 249 aa9.88□□□□□ -0.83
SNCA-202ENST00000345009 SF3B6Q9Y3B4 125 aaKnown RBP9.88□□□□□ -0.83
SNCA-202ENST00000345009 SONP18583 2426 aaKnown RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 NIPBLQ6KC79 2804 aaeCLIP9.87□□□□□ -0.83
SNCA-202ENST00000345009 PPIAL4CA0A0B4J2A2 164 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 A0A0G2JMP0 313 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 A0A0X1KG70 313 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 MAGEA13PA6NCF6 341 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 RFPL4AA6NLU0 287 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 F5H0A9 414 aaPredicted RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 RFPL4AL1F8VTS6 287 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 SH2D1BO14796 132 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 TNFRSF13BO14836 293 aaPredicted RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 PIN1P1O15428 100 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 ANGPTL7O43827 346 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 KDM4BO94953 1096 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 LY6G6DO95868 133 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 ECDO95905 644 aaPredicted RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 CHRM2P08172 466 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 PSG2P11465 335 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 CALRP27797 417 aaKnown RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 PRDX2P32119 198 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 MTNR1BP49286 362 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 DVL1P1P54792 670 aaPredicted RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 ZP1P60852 638 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 LCN2P80188 198 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 HNRNPA0Q13151 305 aaKnown RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 INSL4Q14641 139 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 ASPHD2Q6ICH7 369 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 CD200R1LQ6Q8B3 271 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 BTNL3Q6UXE8 466 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 TMEM91Q6ZNR0 172 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 ZNF561Q8N587 486 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 TEX29Q8N6K0 151 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 OR4M2Q8NGB6 313 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 PPP1R35Q8TAP8 253 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 MUL1Q969V5 352 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 TMEM186Q96B77 213 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 ORAI1Q96D31 301 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 SEBOXQ9HB31 216 aaPredicted RBP9.87□□□□□ -0.83
SNCA-202ENST00000345009 YAE1D1Q9NRH1 226 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 HIF1ANQ9NWT6 349 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 GHRLQ9UBU3 117 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 OR14J1Q9UGF5 321 aa9.87□□□□□ -0.83
SNCA-202ENST00000345009 STUB1Q9UNE7 303 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms