RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CEACAM6P40199 344 aa14.38□□□□□ -0.11
SMARCA4-201ENST00000344626 CSRP3P50461 194 aa14.38□□□□□ -0.11
SMARCA4-201ENST00000344626 FOXO1Q12778 655 aa14.38□□□□□ -0.11
SMARCA4-201ENST00000344626 ASAH1Q13510 395 aa14.38□□□□□ -0.11
SMARCA4-201ENST00000344626 MUC20Q8N307 709 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-201ENST00000344626 HGDQ93099 445 aa14.38□□□□□ -0.11
SMARCA4-201ENST00000344626 K7EQM0 130 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 KIR2DS2P43631 304 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 PIGPP57054 158 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 RTN4IP1Q8WWV3 396 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 LPAR3Q9UBY5 353 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 CLN8Q9UBY8 286 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 A0A1W2PNV4 684 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 IGF2P01344 180 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 CALCRP30988 508 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 CST9LP1Q5W188 147 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 LYSMD2Q8IV50 215 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 FYTTD1Q96QD9 318 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 SSX4O60224 188 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 FBXO24O75426 580 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 GNG10P50151 68 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 CLINT1Q14677 625 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 CD276Q5ZPR3 534 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 C10orf111Q8N326 155 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 IMMP1LQ96LU5 166 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 ZNF649Q9BS31 505 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 GP6Q9HCN6 339 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 RALGAPA1Q6GYQ0 2036 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 IGKV3D-11A0A0A0MRZ8 115 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 TMEM8BA6NDV4 472 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 MGAT2Q10469 447 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 LYG1Q8N1E2 194 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 OR52N4Q8NGI2 321 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 CMTM2Q8TAZ6 248 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 DDOQ99489 341 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 SEC22CQ9BRL7 303 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 SERTAD4Q9NUC0 356 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 PRELID1Q9Y255 219 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 TMEM272A0A1B0GTI8 110 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 IFNL4K9M1U5 179 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 GLI4P10075 376 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 OR3A4PP47883 348 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 AUNIPQ9H7T9 357 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 ZMIZ1Q9ULJ6 1067 aa14.37□□□□□ -0.11
SMARCA4-201ENST00000344626 NUDT19A8MXV4 375 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 OGG1O15527 345 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 POM121L2Q96KW2 1035 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 ZNF436Q9C0F3 470 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 A0A0B4J2A0 478 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 CHATP28329 748 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 FAM27E3Q08E93 113 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 ZXDCQ2QGD7 858 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 ZNF519Q8TB69 540 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 SNRNP40Q96DI7 357 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 ARHGAP5-AS1Q96IT6 56 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 PRSS27Q9BQR3 290 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 SHPKQ9UHJ6 478 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 RECKO95980 971 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 CBR1P16152 277 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 RPS4Y1P22090 263 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 STUMQ69YW2 141 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 SMIM4Q8WVI0 70 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 TXNDC12O95881 172 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 ADRA2AP08913 450 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 BMI1P35226 326 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 MMP15P51511 669 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 MVDP53602 400 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 RAB4BP61018 213 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 DMKNQ6E0U4 476 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 TERB2Q8NHR7 220 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 OR2J1Q9GZK6 312 aa14.36□□□□□ -0.11
SMARCA4-201ENST00000344626 IGLV3-12A0A075B6K2 115 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 ATP6V1G2-DDX39BF2Z307 99 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 CDIPTO14735 213 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 MMP16P51512 607 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 UCP2P55851 309 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 OR8U1Q8NH10 309 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 NPTNQ9Y639 398 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 PRSS53Q2L4Q9 553 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 RIPPLY2Q5TAB7 128 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 OR10P1Q8NGE3 313 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 FAM57AQ8TBR7 257 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 MARCH1Q8TCQ1 289 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 TMEM56Q96MV1 263 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 CNTD2Q9H8S5 307 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 STRAPQ9Y3F4 350 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 HAND1O96004 215 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 IGHA1P01876 353 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 FUT5Q11128 374 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 SUN5Q8TC36 379 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 HES4Q9HCC6 221 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 HIF1ANQ9NWT6 349 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 RPS10-NUDT3A0A1W2PQS6 291 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 SERPINF1P36955 418 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 OR1K1Q8NGR3 316 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 MS4A3Q96HJ5 214 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 SUCNR1Q9BXA5 334 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 CNTNAP3Q9BZ76 1288 aa14.35□□□□□ -0.11
SMARCA4-201ENST00000344626 RNF24Q9Y225 148 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms