RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 OPN1MW3P0DN78 364 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 MS4A18Q3C1V0 323 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 FAM219BQ5XKK7 198 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-202ENST00000342494 PIK3IP1Q96FE7 263 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 TMPRSS13Q9BYE2 586 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 RNF7Q9UBF6 113 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 TMED3Q9Y3Q3 217 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-202ENST00000342494 CLDN20P56880 219 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF574Q6ZN55 896 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-202ENST00000342494 ADTRPQ96IZ2 230 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 NPTNQ9Y639 398 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 ATXN7O15265 892 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-202ENST00000342494 SP1P08047 785 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 COX6B1P14854 86 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 CD226Q15762 336 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 VSTM2AQ8TAG5 236 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 LAMB1P07942 1786 aa13.29□□□□□ -0.28
UBE3B-202ENST00000342494 ADAM10O14672 748 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF205O95201 554 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 TXNDC12O95881 172 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 PGA3P0DJD8 388 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 SELENOPP49908 381 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 TMEM267Q0VDI3 215 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-202ENST00000342494 PDZK1IP1Q13113 114 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 TINAGQ9UJW2 476 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 ASPDHA6ND91 283 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 CD160O95971 181 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
UBE3B-202ENST00000342494 ERVFC1-1P60608 527 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 SPNS3Q6ZMD2 512 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 ABHD3Q8WU67 409 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 LOXL4Q96JB6 756 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 CABLES2Q9BTV7 478 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 LPAR2Q9HBW0 351 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 NAGKQ9UJ70 344 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 SLC37A1P57057 533 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 RNF165Q6ZSG1 346 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 WDR89Q96FK6 387 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-202ENST00000342494 NRTNQ99748 197 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 PECRQ9BY49 303 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 RFPL4AA6NLU0 287 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 RFPL4AL1F8VTS6 287 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 SOX15O60248 233 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 B3GALNT1O75752 331 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 PNPP00491 289 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 SPINK2P20155 84 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 LRP5O75197 1615 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 A0A1W2PQF6 199 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 RASL12Q9NYN1 266 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 OR1A1Q9P1Q5 309 aa13.28□□□□□ -0.28
UBE3B-202ENST00000342494 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 B4E171 279 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 FUCA1P04066 466 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 PRF1P14222 555 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 TSPAN7P41732 249 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 Q6ZNX1 250 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 ASCL5Q7RTU5 278 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 LRRTM1Q86UE6 522 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 NHLRC2Q8NBF2 726 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 OR4S2Q8NH73 311 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 NTN4Q9HB63 628 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 SIRT5Q9NXA8 310 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 C3orf85A0A1B0GTC6 90 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 PYCARD-AS1I3L0S3 204 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 PCMT1P22061 227 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.28
UBE3B-202ENST00000342494 TMPRSS3P57727 454 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 SLC38A11Q08AI6 406 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 ETV3LQ6ZN32 361 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 SIGLECL1Q8N7X8 197 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 RELL2Q8NC24 303 aaPredicted RBP13.27□□□□□ -0.28
UBE3B-202ENST00000342494 NKX6-2Q9C056 277 aaPredicted RBP13.27□□□□□ -0.28
UBE3B-202ENST00000342494 SIRT3Q9NTG7 399 aaPredicted RBP13.27□□□□□ -0.28
UBE3B-202ENST00000342494 SLC2A8Q9NY64 477 aa13.27□□□□□ -0.28
UBE3B-202ENST00000342494 ZNF716A6NP11 495 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 TCAPO15273 167 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 PLPP2O43688 288 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 GFRA3O60609 400 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 CST2P09228 141 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 PSG6Q00889 435 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 FFAR4Q5NUL3 377 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 MSRB3Q8IXL7 192 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 OR8B12Q8NGG6 310 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 ASB13Q8WXK3 278 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 RAB40CQ96S21 281 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 SLC25A22Q9H936 323 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 DOCK1Q14185 1865 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 CDIPTO14735 213 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 WNT1P04628 370 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 PNLIPP16233 465 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 LSM6P62312 80 aaKnown RBP13.27□□□□□ -0.29
UBE3B-202ENST00000342494 ETFDHQ16134 617 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 C11orf42Q8N5U0 333 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms