RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 PMS2P1A4D2B8 440 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 H7C1Q1 480 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 SOX15O60248 233 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 MRPL33O75394 65 aaKnown RBP10.97□□□□□ -0.65
LMX1A-202ENST00000342310 RIPPLY1Q0D2K3 151 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 MALLQ13021 153 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 MPPED2Q15777 294 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 LPCAT3Q6P1A2 487 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 OR9K2Q8NGE7 335 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 SFT2D1Q8WV19 159 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 UQCC2Q9BRT2 126 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 HES7Q9BYE0 225 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 IFT22Q9H7X7 185 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 OR6C65A6NJZ3 312 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 PTGER4P35408 488 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 MEOX2P50222 304 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 NDUFA6P56556 154 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 USF2Q15853 346 aaPredicted RBP10.97□□□□□ -0.65
LMX1A-202ENST00000342310 SHEQ5VZ18 495 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 C5orf46Q6UWT4 87 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 RABEPKQ7Z6M1 372 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 BSCL2Q96G97 398 aaPredicted RBP10.97□□□□□ -0.65
LMX1A-202ENST00000342310 NELFAQ9H3P2 528 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 ZFP57Q9NU63 452 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 UQCC1Q9NVA1 299 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 GTF3C1Q12789 2109 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 A0A1W2PPH5 198 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 DHRS3O75911 302 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 IGHV3-13P01766 116 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 IGHV3-7P01780 117 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 APOC1P02654 83 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 F2RL1P55085 397 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 GRB2P62993 217 aaKnown RBP10.97□□□□□ -0.65
LMX1A-202ENST00000342310 ECH1Q13011 328 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 EIF2S3LQ2VIR3 472 aaKnown RBP10.97□□□□□ -0.65
LMX1A-202ENST00000342310 GPR157Q5UAW9 335 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 CXorf67Q86X51 503 aaPredicted RBP10.97□□□□□ -0.65
LMX1A-202ENST00000342310 SPEM1Q8N4L4 309 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 MRGPRFQ96AM1 343 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 PFDN5Q99471 154 aa10.97□□□□□ -0.65
LMX1A-202ENST00000342310 LINC00587B1AMM8 73 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 RNASEK-C17orf49H0YIS7 233 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 SELEP16581 610 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 NPBWR2P48146 333 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 POLR2GP62487 172 aaKnown RBP eCLIP10.96□□□□□ -0.65
LMX1A-202ENST00000342310 FAM166AQ6J272 317 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 DEGS2Q6QHC5 323 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 MRPL21Q7Z2W9 205 aaKnown RBP10.96□□□□□ -0.65
LMX1A-202ENST00000342310 HOGA1Q86XE5 327 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 DTX1Q86Y01 620 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 ZDHHC22Q8N966 263 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 ERGIC1Q969X5 290 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 TMEM230Q96A57 120 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 RNF126Q9BV68 326 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 TGIF2Q9GZN2 237 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 RAB33BQ9H082 229 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 SH3BGRL3Q9H299 93 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 IL36RNQ9UBH0 155 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 GPR132Q9UNW8 380 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 MGAQ8IWI9 3026 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 GSTP1P09211 210 aaKnown RBP10.96□□□□□ -0.65
LMX1A-202ENST00000342310 ZNF674Q2M3X9 581 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 STX12Q86Y82 276 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 DTWD2Q8NBA8 298 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 NAT6Q93015 286 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
LMX1A-202ENST00000342310 LTBP2Q14767 1821 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 TMEM14DPA8MWL7 114 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 LAMTOR5O43504 91 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 FOSL2P15408 326 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 BMP5P22003 454 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 EPHA8P29322 1005 aaPredicted RBP10.96□□□□□ -0.66
LMX1A-202ENST00000342310 ZNF100Q8IYN0 542 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 TMEM123Q8N131 208 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 ARRDC1Q8N5I2 433 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 IL22RA1Q8N6P7 574 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 OR6X1Q8NH79 312 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 SRXN1Q9BYN0 137 aa10.96□□□□□ -0.66
LMX1A-202ENST00000342310 ALX4Q9H161 411 aaPredicted RBP10.96□□□□□ -0.66
LMX1A-202ENST00000342310 NOSIPQ9Y314 301 aaKnown RBP10.96□□□□□ -0.66
LMX1A-202ENST00000342310 FABP1P07148 127 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 FSTP19883 344 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 MDKP21741 143 aaPredicted RBP10.95□□□□□ -0.66
LMX1A-202ENST00000342310 EIF1P41567 113 aaKnown RBP10.95□□□□□ -0.66
LMX1A-202ENST00000342310 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
LMX1A-202ENST00000342310 CADM4Q8NFZ8 388 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 THOC3Q96J01 351 aaKnown RBP10.95□□□□□ -0.66
LMX1A-202ENST00000342310 LYZL4Q96KX0 146 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 A0A1W2PPE2 198 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 HSPB2A8KAH6 182 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 CD74P04233 296 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 HSPB2Q16082 182 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 FAM209BQ5JX69 171 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 FDX2Q6P4F2 183 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 OR14K1Q8NGZ2 314 aa10.95□□□□□ -0.66
LMX1A-202ENST00000342310 OR10D3Q8NH80 312 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms