RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 HSPB2Q16082 182 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 MOGAT2Q3SYC2 334 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 RAB12Q6IQ22 244 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 TGIF2LXQ8IUE1 241 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 RNF133Q8WVZ7 376 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 PCDHB10Q9UN67 800 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 RAXQ9Y2V3 346 aa11.39□□□□□ -0.59
COL18A1-201ENST00000342220 COL27A1Q8IZC6 1860 aaPredicted RBP11.39□□□□□ -0.59
COL18A1-201ENST00000342220 TRAV14DV4A0A0A6YYC5 116 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
COL18A1-201ENST00000342220 E9PLN8 166 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 CFPP27918 469 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 RBMXP38159 391 aaKnown RBP11.38□□□□□ -0.59
COL18A1-201ENST00000342220 BPIFB3P59826 476 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 SNAI3Q3KNW1 292 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 TMEM244Q5VVB8 128 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 GLT8D1Q68CQ7 371 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 FZR1Q9UM11 496 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 PIGLQ9Y2B2 252 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 FAM208BQ5VWN6 2430 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 A0A1W2PP11 408 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF716A6NP11 495 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 EEF1E1-BLOC1S5C9J1V9 151 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 ANGPTL7O43827 346 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 TAS2R19P59542 299 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 ACTBP60709 375 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 ACTG1P63261 375 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 LY6G6FQ5SQ64 297 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 CATSPERDQ86XM0 798 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 ARMC10Q8N2F6 343 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 SLC22A24Q8N4F4 322 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 PIGMQ9H3S5 423 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 GPR35Q9HC97 309 aa11.38□□□□□ -0.59
COL18A1-201ENST00000342220 SNAPC5O75971 98 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 AGFG2O95081 481 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 FKBP2P26885 142 aaKnown RBP11.37□□□□□ -0.59
COL18A1-201ENST00000342220 AKR1C3P42330 323 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 RAB1AP62820 205 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 SCGB2B2Q4G0G5 96 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 MDS2Q8NDY4 140 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 OR1J2Q8NGS2 313 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 SPTSSAQ969W0 71 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 RASL12Q9NYN1 266 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 BTBD17A6NE02 478 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 MKRN2OSH3BPM6 223 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 CD82P27701 267 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 MPGP29372 298 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 BDKRB2P30411 391 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 ROM1Q03395 351 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 MPPED2Q15777 294 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 NKAPLQ5M9Q1 402 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 VHLLQ6RSH7 139 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 RPRMLQ8N4K4 120 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 STEAP2Q8NFT2 490 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 OR4S1Q8NGB4 309 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 RNF138Q8WVD3 245 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 TAAR6Q96RI8 345 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 SLC17A5Q9NRA2 495 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 WASF3Q9UPY6 502 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 TMEM235A6NFC5 223 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 MBP02144 154 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 SERPINA2P20848 420 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 LUMP51884 338 aaPredicted RBP11.37□□□□□ -0.59
COL18A1-201ENST00000342220 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
COL18A1-201ENST00000342220 NKPD1Q17RQ9 610 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 BEX5Q5H9J7 111 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 BRICD5Q6PL45 260 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 ANGPTL5Q86XS5 388 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 THRSPQ92748 146 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 SUCNR1Q9BXA5 334 aa11.37□□□□□ -0.59
COL18A1-201ENST00000342220 UNKLQ9H9P5 680 aaKnown RBP11.37□□□□□ -0.59
COL18A1-201ENST00000342220 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
COL18A1-201ENST00000342220 RFPL4AA6NLU0 287 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 RFPL4AL1F8VTS6 287 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TMEM225BP0DP42 221 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 IGFBP3P17936 291 aaPredicted RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 PSG4Q00888 419 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 PMPCAQ10713 525 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 OR52W1Q6IF63 320 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 UNQ6494/PRO21346Q6UXR6 183 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ZNF546Q86UE3 836 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TMEM123Q8N131 208 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 ZFP62Q8NB50 900 aaPredicted RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 TP53TG5Q9Y2B4 290 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 SPENQ96T58 3664 aaKnown RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 CCSO14618 274 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 CRTAPO75718 401 aaPredicted RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 IGHMP01871 453 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 FCGR2AP12318 317 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 RPA2P15927 270 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
COL18A1-201ENST00000342220 PLP2Q04941 152 aa11.36□□□□□ -0.59
COL18A1-201ENST00000342220 LRRC37A5PQ49AS3 106 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms