RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 HIKESHIQ53FT3 197 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 DMRTC1Q5HYR2 192 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 SHISA6Q6ZSJ9 500 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 SYT13Q7L8C5 426 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 PPP1R3BQ86XI6 285 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 SUMF2Q8NBJ7 301 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 PIGTQ969N2 578 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 SYT3Q9BQG1 590 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 AK3Q9UIJ7 227 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 TCFL5Q9UL49 500 aa18.02■□□□□ 0.48
CLPB-202ENST00000340729 XRCC2O43543 280 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 GUCA1AP43080 201 aaPredicted RBP18.02■□□□□ 0.47
CLPB-202ENST00000340729 HNRNPKP61978 463 aaKnown RBP eCLIP18.02■□□□□ 0.47
CLPB-202ENST00000340729 ENDOGQ14249 297 aaKnown RBP18.02■□□□□ 0.47
CLPB-202ENST00000340729 WDSUB1Q8N9V3 476 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 OR2M3Q8NG83 312 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 OR4D5Q8NGN0 318 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 MUCL1Q96DR8 90 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 TOLLIPQ9H0E2 274 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 C11orf1Q9H5F2 150 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 UBE2ZQ9H832 354 aaPredicted RBP18.02■□□□□ 0.47
CLPB-202ENST00000340729 SLC2A9Q9NRM0 540 aa18.02■□□□□ 0.47
CLPB-202ENST00000340729 A0A087WWC5 75 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 TRBV11-1A0A0K0K1C0 115 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 ZNF850A8MQ14 1090 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 RAMP1O60894 148 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 HEXBP07686 556 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 PPP1CCP36873 323 aaKnown RBP18.01■□□□□ 0.47
CLPB-202ENST00000340729 RSPO1Q2MKA7 263 aaPredicted RBP18.01■□□□□ 0.47
CLPB-202ENST00000340729 SP6Q3SY56 376 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 DTX1Q86Y01 620 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 DEFB119Q8N690 84 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 GGACTQ9BVM4 153 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 FGF21Q9NSA1 209 aa18.01■□□□□ 0.47
CLPB-202ENST00000340729 CEP192Q8TEP8 1941 aa18■□□□□ 0.47
CLPB-202ENST00000340729 IGHV1OR15-9A0A0B4J2B8 117 aa18■□□□□ 0.47
CLPB-202ENST00000340729 ZNF729A6NN14 1252 aaPredicted RBP18■□□□□ 0.47
CLPB-202ENST00000340729 F5H5K5 113 aa18■□□□□ 0.47
CLPB-202ENST00000340729 CSNK1A1P48729 337 aa18■□□□□ 0.47
CLPB-202ENST00000340729 AFF3P51826 1226 aaKnown RBP18■□□□□ 0.47
CLPB-202ENST00000340729 NHLH2Q02577 135 aa18■□□□□ 0.47
CLPB-202ENST00000340729 ZNF266Q14584 549 aa18■□□□□ 0.47
CLPB-202ENST00000340729 RHBDD2Q6NTF9 364 aa18■□□□□ 0.47
CLPB-202ENST00000340729 ASCL4Q6XD76 172 aa18■□□□□ 0.47
CLPB-202ENST00000340729 HSD17B11Q8NBQ5 300 aa18■□□□□ 0.47
CLPB-202ENST00000340729 TSTD1Q8NFU3 115 aa18■□□□□ 0.47
CLPB-202ENST00000340729 OR52M1Q8NGK5 317 aa18■□□□□ 0.47
CLPB-202ENST00000340729 TMEM54Q969K7 222 aa18■□□□□ 0.47
CLPB-202ENST00000340729 TOMM40LQ969M1 308 aa18■□□□□ 0.47
CLPB-202ENST00000340729 BOD1Q96IK1 185 aa18■□□□□ 0.47
CLPB-202ENST00000340729 FAAP24Q9BTP7 215 aa18■□□□□ 0.47
CLPB-202ENST00000340729 MYO15AQ9UKN7 3530 aa18■□□□□ 0.47
CLPB-202ENST00000340729 RALGAPA1Q6GYQ0 2036 aa18■□□□□ 0.47
CLPB-202ENST00000340729 OR13C7P0DN81 318 aa18■□□□□ 0.47
CLPB-202ENST00000340729 CDX1P47902 265 aaPredicted RBP18■□□□□ 0.47
CLPB-202ENST00000340729 GNMTQ14749 295 aa18■□□□□ 0.47
CLPB-202ENST00000340729 FAM213BQ8TBF2 198 aa18■□□□□ 0.47
CLPB-202ENST00000340729 NABP1Q96AH0 204 aa18■□□□□ 0.47
CLPB-202ENST00000340729 MOB3AQ96BX8 217 aa18■□□□□ 0.47
CLPB-202ENST00000340729 MARS2Q96GW9 593 aaKnown RBP18■□□□□ 0.47
CLPB-202ENST00000340729 METTL7AQ9H8H3 244 aa18■□□□□ 0.47
CLPB-202ENST00000340729 RCL1Q9Y2P8 373 aaKnown RBP18■□□□□ 0.47
CLPB-202ENST00000340729 ADAMTS20P59510 1910 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 TERTO14746 1132 aaKnown RBP17.99■□□□□ 0.47
CLPB-202ENST00000340729 SFTPDP35247 375 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 CLDN17P56750 224 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 EWSR1Q01844 656 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLPB-202ENST00000340729 SP5Q6BEB4 398 aaPredicted RBP17.99■□□□□ 0.47
CLPB-202ENST00000340729 TMEM182Q6ZP80 229 aaPredicted RBP17.99■□□□□ 0.47
CLPB-202ENST00000340729 CCDC71LQ8N9Z2 235 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 BCL2L14Q9BZR8 327 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 HIPK2Q9H2X6 1198 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 NCOA6Q14686 2063 aaPredicted RBP17.99■□□□□ 0.47
CLPB-202ENST00000340729 RBFOX3A6NFN3 312 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 M0R135 149 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 CDS2O95674 445 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 MTCP1P56278 107 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 ZNF799Q96GE5 643 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 PAPOLGQ9BWT3 736 aaKnown RBP17.99■□□□□ 0.47
CLPB-202ENST00000340729 PRO3102Q9H379 93 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 TREM2Q9NZC2 230 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 KIAA1456Q9P272 454 aa17.99■□□□□ 0.47
CLPB-202ENST00000340729 NXT1Q9UKK6 140 aaKnown RBP17.99■□□□□ 0.47
CLPB-202ENST00000340729 LAMA1P25391 3075 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 CCDC187A0A096LP49 1063 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 PITX3O75364 302 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 OPN1LWP04000 364 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 FOXL2P58012 376 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 SRPXP78539 464 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 KIAA0141Q14154 515 aaPredicted RBP17.98■□□□□ 0.47
CLPB-202ENST00000340729 RSU1Q15404 277 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 FADS6Q8N9I5 356 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 OR10G3Q8NGC4 313 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 ABHD14BQ96IU4 210 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 WDR77Q9BQA1 342 aaPredicted RBP17.98■□□□□ 0.47
CLPB-202ENST00000340729 BCO1Q9HAY6 547 aa17.98■□□□□ 0.47
CLPB-202ENST00000340729 TRIOBPQ9H2D6 2365 aa17.97■□□□□ 0.47
CLPB-202ENST00000340729 OR5H15A6NDH6 313 aa17.97■□□□□ 0.47
CLPB-202ENST00000340729 CXorf65A6NEN9 183 aa17.97■□□□□ 0.47
CLPB-202ENST00000340729 METTL12A8MUP2 240 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms