RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 PDCD6O75340 191 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 CYB5R3P00387 301 aaPredicted RBP11.17□□□□□ -0.62
LIN54-201ENST00000340417 OPRL1P41146 370 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 FABP5Q01469 135 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 SP5Q6BEB4 398 aaPredicted RBP11.17□□□□□ -0.62
LIN54-201ENST00000340417 ZNF418Q8TF45 676 aaPredicted RBP11.17□□□□□ -0.62
LIN54-201ENST00000340417 TMEM56Q96MV1 263 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 KCNIP2Q9NS61 270 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 SPRR3Q9UBC9 169 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 FABP7O15540 132 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 SEMA7AO75326 666 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 DAOP14920 347 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 PRDX2P32119 198 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 MRPS11P82912 194 aaKnown RBP11.17□□□□□ -0.62
LIN54-201ENST00000340417 ZNF85Q03923 595 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 OR8G5Q8NG78 346 aa11.17□□□□□ -0.62
LIN54-201ENST00000340417 SSX5O60225 188 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 Q6ZRG5 221 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 TGIF2LXQ8IUE1 241 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 OR52N4Q8NGI2 321 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 KLF14Q8TD94 323 aaPredicted RBP11.16□□□□□ -0.62
LIN54-201ENST00000340417 RNF133Q8WVZ7 376 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 TMEM45BQ96B21 275 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 FAAP24Q9BTP7 215 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 NTN4Q9HB63 628 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 GPR27Q9NS67 375 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 IL36GQ9NZH8 169 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 MRM2Q9UI43 246 aaKnown RBP11.16□□□□□ -0.62
LIN54-201ENST00000340417 TRBV5-3A0A0A0MS03 114 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 OOEPA6NGQ2 149 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 MS4A18H0YCH9 400 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 ZFPL1O95159 310 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 MS4A18Q3C1V0 323 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 ZNF596Q8TC21 504 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 GZMHP20718 246 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 COL10A1Q03692 680 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 FUT5Q11128 374 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 CMPK2Q5EBM0 449 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 SLC25A30Q5SVS4 291 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 FADS6Q8N9I5 356 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 C1orf162Q8NEQ5 155 aaPredicted RBP11.16□□□□□ -0.62
LIN54-201ENST00000340417 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 Q6ZS92 163 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 DHRS9Q9BPW9 319 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 RSRP1Q9BUV0 290 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 MMP28Q9H239 520 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 TMEFF2Q9UIK5 374 aaPredicted RBP11.16□□□□□ -0.62
LIN54-201ENST00000340417 EXOGQ9Y2C4 368 aaKnown RBP11.16□□□□□ -0.62
LIN54-201ENST00000340417 LINC00470Q9BZP3 86 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 THYN1Q9P016 225 aa11.16□□□□□ -0.62
LIN54-201ENST00000340417 PI4KAP42356 2102 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 F2RP25116 425 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 LHX2P50458 406 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 IAH1Q2TAA2 248 aaPredicted RBP11.15□□□□□ -0.62
LIN54-201ENST00000340417 DAZAP1Q96EP5 407 aaKnown RBP11.15□□□□□ -0.62
LIN54-201ENST00000340417 ZNF714Q96N38 554 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 IL19Q9UHD0 177 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 IGHV3OR16-10A0A075B7F0 116 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 SLC35B1P78383 322 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 TMEM217Q8N7C4 229 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 CITED4Q96RK1 184 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 OR51J1Q9H342 316 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 SLC52A3Q9NQ40 469 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 RP1P56715 2156 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 RPS10-NUDT3A0A1W2PQS6 291 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 PINLYPA6NC86 204 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 ZFP92A6NM28 416 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 PSD2Q9BQI7 771 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 OR2D2Q9H210 308 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 K7EPK0 472 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
LIN54-201ENST00000340417 PSMB1P20618 241 aaKnown RBP11.15□□□□□ -0.62
LIN54-201ENST00000340417 ERP29P30040 261 aaKnown RBP11.15□□□□□ -0.62
LIN54-201ENST00000340417 KIR2DS2P43631 304 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 CLDN18P56856 261 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 TNXAQ16473 311 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 FAM71E2Q8N5Q1 922 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 OR51S1Q8NGJ8 323 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
LIN54-201ENST00000340417 NUP214P35658 2090 aaPredicted RBP11.15□□□□□ -0.63
LIN54-201ENST00000340417 PCM1Q15154 2024 aa11.15□□□□□ -0.63
LIN54-201ENST00000340417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.63
LIN54-201ENST00000340417 UPK1BO75841 260 aa11.15□□□□□ -0.63
LIN54-201ENST00000340417 GLRXP35754 106 aa11.15□□□□□ -0.63
LIN54-201ENST00000340417 PARP16Q8N5Y8 322 aa11.15□□□□□ -0.63
LIN54-201ENST00000340417 SLC25A21Q9BQT8 299 aaPredicted RBP11.15□□□□□ -0.63
LIN54-201ENST00000340417 KCNE5Q9UJ90 142 aa11.15□□□□□ -0.63
LIN54-201ENST00000340417 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
LIN54-201ENST00000340417 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
LIN54-201ENST00000340417 ZBTB37Q5TC79 503 aa11.14□□□□□ -0.63
LIN54-201ENST00000340417 C6orf201Q7Z4U5 140 aa11.14□□□□□ -0.63
LIN54-201ENST00000340417 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
LIN54-201ENST00000340417 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
LIN54-201ENST00000340417 RBMXL1Q96E39 390 aaKnown RBP11.14□□□□□ -0.63
LIN54-201ENST00000340417 NEIL1Q96FI4 390 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms