RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 OR5H14A6NHG9 310 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 LINC01387J3KSC0 135 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 RP2O75695 350 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 SCGNO76038 276 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 ACTL6AO96019 429 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 FCGR2CP31995 323 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 OTX1P32242 354 aaPredicted RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 FUT6P51993 359 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 HERV-K104P61576 105 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 CLEC9AQ6UXN8 241 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 LYG2Q86SG7 212 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 THAP6Q8TBB0 222 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 NANOS1Q8WY41 292 aaKnown RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 EMG1Q92979 244 aaKnown RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 NARS2Q96I59 477 aaKnown RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 TREM2Q9NZC2 230 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 TINAGQ9UJW2 476 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 LSM5Q9Y4Y9 91 aaKnown RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 RELNP78509 3460 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 A0A0A6YYH2 397 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 A6NJ64 397 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 SNRPGP15A8MWD9 76 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 TM4SF5O14894 197 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 RHBDL1O75783 438 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 IL5P05113 134 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 BMP5P22003 454 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 RAG2P55895 527 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 SNTB1Q13884 538 aaKnown RBP8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 TBC1D28Q2M2D7 210 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 ASCL5Q7RTU5 278 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 MKXQ8IYA7 352 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 LRFN3Q9BTN0 628 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 FN3KRPQ9HA64 309 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 MBD2Q9UBB5 411 aa8.77□□□□□ -1.01
RBFOX1-202ENST00000340209 OR14I1A6ND48 311 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 TTLL8A6PVC2 850 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 F5H0A9 414 aaPredicted RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 MPGP29372 298 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 WNT5AP41221 380 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 ZNF83P51522 516 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 IGSF11Q5DX21 431 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 FAM180AQ6UWF9 173 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 ZNF826PQ6ZT77 177 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 LYPD6Q86Y78 171 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 OR11L1Q8NGX0 322 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 CPNE2Q96FN4 548 aaPredicted RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 TAAR6Q96RI8 345 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 BCO1Q9HAY6 547 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 ANKRD34BA5PLL1 514 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 CDRT15L2A8MXV6 281 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 HSPA12AO43301 675 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 ARR3P36575 388 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 TEX261Q6UWH6 196 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 TMUB2Q71RG4 321 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 TMEM200AQ86VY9 491 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 ZSCAN4Q8NAM6 433 aaPredicted RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 OR1K1Q8NGR3 316 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 EXTL1Q92935 676 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 UBQLN2Q9UHD9 624 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 U3KQ87 197 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 ZNF891A8MT65 544 aaPredicted RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 CDIPTO14735 213 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 EFSO43281 561 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 IFNA7P01567 189 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 S100A1P23297 94 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 LUMP51884 338 aaPredicted RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 HIST1H3AP68431 136 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 HIST2H3PS2Q5TEC6 136 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 SIGIRRQ6IA17 410 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 GSG1LQ6UXU4 331 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 HIST2H3AQ71DI3 136 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 MARS2Q96GW9 593 aaKnown RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 Q96M66 194 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 C5orf66Q9H5L9 145 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 DLL3Q9NYJ7 618 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 RALYQ9UKM9 306 aaKnown RBP8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 MAB21L2Q9Y586 359 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 KCNMB2Q9Y691 235 aa8.76□□□□□ -1.01
RBFOX1-202ENST00000340209 A0A0B4J2A0 478 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 TMEM127O75204 238 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 IGHV1-2P23083 117 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 CALCRP30988 508 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 GLP1RP43220 463 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 TAS2R46P59540 309 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 ZNF529Q6P280 563 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 CLEC18BQ6UXF7 455 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 RNASE11Q8TAA1 199 aaKnown RBP8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 SLC25A40Q8TBP6 338 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 SHPKQ9UHJ6 478 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 HSD17B6O14756 317 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 TIMM8AO60220 97 aaPredicted RBP8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 FOXL2NBQ6ZUU3 175 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 ZNF610Q8N9Z0 462 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 INO80EQ8NBZ0 244 aaPredicted RBP8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 OR5AP2Q8NGF4 316 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 PTX4Q96A99 478 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 MRGPRFQ96AM1 343 aa8.75□□□□□ -1.01
RBFOX1-202ENST00000340209 SARAFQ96BY9 339 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms